RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SOX9P48436 509 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 ALDH5A1P51649 535 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 CYP4A11Q02928 519 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 UBXN1Q04323 297 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 GCKRQ14397 625 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 OASLQ15646 514 aaKnown RBP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 TSGA10IPQ3SY00 556 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 ANKDD1AQ495B1 522 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 BEND3Q5T5X7 828 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 C1orf53Q5VUE5 145 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 KDELC1Q6UW63 502 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 EPHX4Q8IUS5 362 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 LINS1Q8NG48 757 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 PANK1Q8TE04 598 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 TTC17Q96AE7 1141 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 EAF1Q96JC9 268 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 CNDP1Q96KN2 507 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 MPHOSPH8Q99549 860 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 TRPV5Q9NQA5 729 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZNF624Q9P2J8 865 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 C10orf71Q711Q0 1435 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 N4BP2Q86UW6 1770 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 AFDNP55196 1824 aaKnown RBP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 SYNJ2BP-COX16A0A087WUM0 186 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 C17orf113A0A1B0GUU1 675 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 PLOD2O00469 737 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZBTB43O43298 467 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 DKC1O60832 514 aaKnown RBP eCLIP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 STAM2O75886 525 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 DGKIO75912 1065 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 SNX4O95219 450 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 KRT1P04264 644 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 MYBP10242 640 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 HSD3B1P14060 373 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 STMN1P16949 149 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 MATR3P43243 847 aaKnown RBP eCLIP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 KCNC4Q03721 635 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 IFIT5Q13325 482 aaKnown RBP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 ORC1Q13415 861 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 SLC14A2Q15849 920 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 C20orf194Q5TEA3 1177 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 TATDN1Q6P1N9 297 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 ATF7IPQ6VMQ6 1270 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 GBP6Q6ZN66 633 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 KDELC2Q7Z4H8 507 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 GALNTL5Q7Z4T8 443 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 TRIM50Q86XT4 487 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 MAP4K3Q8IVH8 894 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 ITPRIPQ8IWB1 547 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZBTB38Q8NAP3 1195 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 TSEN2Q8NCE0 465 aaKnown RBP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 RUFY2Q8WXA3 655 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 RABGGTAQ92696 567 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 SDF4Q9BRK5 362 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 RABEP2Q9H5N1 569 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 PIM2Q9P1W9 311 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 METRNQ9UJH8 293 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 DUSP12Q9UNI6 340 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 GPR34Q9UPC5 381 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 PTPRCP08575 1304 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 PXDNLA1KZ92 1463 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 LRP5O75197 1615 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 POTEFA5A3E0 1075 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 TRIM75PA6NK02 468 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 MINDY4BA8MYZ0 360 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 INO80B-WBP1J3KQ70 363 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 MASP2O00187 686 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 TULP2O00295 520 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 AREL1O15033 823 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 DDX3YO15523 660 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 FOXD2O60548 495 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 KINO60870 393 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 THEGLP0DJG4 465 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 RLBP1P12271 317 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 ATP1A3P13637 1013 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 KCNA3P22001 575 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 GRK6P43250 576 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 RABEP1Q15276 862 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 PDCD2Q16342 344 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 PKN1Q16512 942 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 IMMTQ16891 758 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 MAJINQ3KP22 176 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC122Q5T0U0 273 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 GPR158Q5T848 1215 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 PI16Q6UXB8 463 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 TMEM92Q6UXU6 159 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC80Q76M96 950 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 SLC9B2Q86UD5 537 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 COLGALT2Q8IYK4 626 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 TMEM57Q8N5G2 664 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 SSH3Q8TE77 659 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 CTNNBL1Q8WYA6 563 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 TIGD1Q96MW7 591 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 RBM14Q96PK6 669 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 ADPGKQ9BRR6 497 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 YIPF2Q9BWQ6 316 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 SAP130Q9H0E3 1048 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 SIL1Q9H173 461 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 RSAD1Q9HA92 442 aa5.55□□□□□ -1.52
TRAPPC11-208ENST00000511955 SEC31BQ9NQW1 1179 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms