RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 C4BP0C0L5 1744 aa5.33□□□□□ -1.56
PTPN13-209ENST00000511467 KLRF2D3W0D1 207 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 POLR2DO15514 142 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 AARSP49588 968 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 POU5F1Q01860 360 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CCDC144BQ3MJ40 725 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 PRUNE1Q86TP1 453 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 C2orf69Q8N8R5 385 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 VPS50Q96JG6 964 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CENPKQ9BS16 269 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CCSER1Q9C0I3 900 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 ENOPH1Q9UHY7 261 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CPSF3Q9UKF6 684 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 STK38LQ9Y2H1 464 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 EMSYQ7Z589 1322 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 ATXN2Q99700 1313 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 MAP3K13O43283 966 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 EXOC3O60645 756 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 SLFN14P0C7P3 912 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 KRT5P13647 590 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 ABL2P42684 1182 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 BFSP1Q12934 665 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 P3H1Q32P28 736 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 TTC30AQ86WT1 665 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 TTC30BQ8N4P2 665 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CHST13Q8NET6 341 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 TXLNGQ9NUQ3 528 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 NMRK1Q9NWW6 199 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 ITIH6Q6UXX5 1313 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 DOCK3Q8IZD9 2030 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CHUKO15111 745 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CEBPZQ03701 1054 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CEP120Q8N960 986 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 SCG3Q8WXD2 468 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 SCN9AQ15858 1988 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 AHDC1Q5TGY3 1603 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 SMCO2A6NFE2 343 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 NCAM2O15394 837 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CYP2C8P10632 490 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 NNTQ13423 1086 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 EZH2Q15910 746 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 HERC4Q5GLZ8 1057 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 RFX8Q6ZV50 586 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 PGBD4Q96DM1 585 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 C8orf4Q9NR00 106 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 PUF60Q9UHX1 559 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 RCOR1Q9UKL0 485 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CHEK2O96017 543 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 ERBB2P04626 1255 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 BRAFP15056 766 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 KLHL30Q0D2K2 578 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 TFDP2Q14188 446 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 PLS1Q14651 629 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 SETD3Q86TU7 594 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 SUGP1Q8IWZ8 645 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 THOC1Q96FV9 657 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 RTN4Q9NQC3 1192 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 KCTD5Q9NXV2 234 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 TFIP11Q9UBB9 837 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 BAG5Q9UL15 447 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 WDR46O15213 610 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 CYP2E1P05181 493 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 TMEM191BP0C7N4 346 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 MCM7P33993 719 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 HDAC4P56524 1084 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 IRX5P78411 483 aaPredicted RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 C8orf34Q49A92 452 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 C6orf118Q5T5N4 469 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 NBPF10Q6P3W6 841 aaKnown RBP5.32□□□□□ -1.56
PTPN13-209ENST00000511467 STAP1Q9ULZ2 295 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 SMCHD1A6NHR9 2005 aa5.32□□□□□ -1.56
PTPN13-209ENST00000511467 MYO1FO00160 1098 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 GNRH1P01148 92 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 PRKAA2P54646 552 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 MAPRE2Q15555 327 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 CCDC184Q52MB2 194 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 STK11IPQ8N1F8 1099 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 MYCT1Q8N699 235 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 AFAP1L1Q8TED9 768 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 WNT8AQ9H1J5 351 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 USP17L8P0C7I0 530 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 MED21Q13503 144 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 EXOC3L4Q17RC7 722 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 KRT24Q2M2I5 525 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 SPDYCQ5MJ68 293 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 UNC13DQ70J99 1090 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 OTUB1Q96FW1 271 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 NHEJ1Q9H9Q4 299 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 CASQ2O14958 399 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 MAPK13O15264 365 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 MMP1P03956 469 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 MX2P20592 715 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 ANXA11P50995 505 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 CCT2P78371 535 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 IL9RQ01113 521 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 SNX1Q13596 522 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 RAPGEF1Q13905 1077 aa5.31□□□□□ -1.56
PTPN13-209ENST00000511467 DHX34Q14147 1143 aaKnown RBP5.31□□□□□ -1.56
PTPN13-209ENST00000511467 C2CD5Q86YS7 1000 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms