RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 GSTA1P08263 222 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 TMEM253P0C7T8 217 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 XRCC5P13010 732 aaKnown RBP9.91□□□□□ -0.82
SNF8-210ENST00000511214 NR2F2P24468 414 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 PON1P27169 355 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 MAP2K2P36507 400 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 STAT1P42224 750 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 HADHBP55084 474 aaKnown RBP9.91□□□□□ -0.82
SNF8-210ENST00000511214 RHBDL3P58872 404 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 POU5F1Q01860 360 aaKnown RBP9.91□□□□□ -0.82
SNF8-210ENST00000511214 GABPAQ06546 454 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 IFT88Q13099 833 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 BYSLQ13895 437 aaKnown RBP9.91□□□□□ -0.82
SNF8-210ENST00000511214 DHX34Q14147 1143 aaKnown RBP9.91□□□□□ -0.82
SNF8-210ENST00000511214 DIXDC1Q155Q3 683 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 PREPLQ4J6C6 727 aaPredicted RBP9.91□□□□□ -0.82
SNF8-210ENST00000511214 WLSQ5T9L3 541 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 GKAP1Q5VSY0 366 aaPredicted RBP9.91□□□□□ -0.82
SNF8-210ENST00000511214 NT5DC3Q86UY8 548 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 SYT2Q8N9I0 419 aaPredicted RBP9.91□□□□□ -0.82
SNF8-210ENST00000511214 TATDN2Q93075 761 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 COA7Q96BR5 231 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 PGM2Q96G03 612 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 PSMD1Q99460 953 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 MKNK1Q9BUB5 465 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 TMEM109Q9BVC6 243 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 UBA5Q9GZZ9 404 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 CARD9Q9H257 536 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 CPVLQ9H3G5 476 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 JMJD4Q9H9V9 463 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 DDX20Q9UHI6 824 aaKnown RBP9.91□□□□□ -0.82
SNF8-210ENST00000511214 AMFRQ9UKV5 643 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 KIAA1024Q9UPX6 916 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 MTMR7Q9Y216 660 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 FOCADQ5VW36 1801 aa9.91□□□□□ -0.82
SNF8-210ENST00000511214 SPATA31A5Q5VU36 1347 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 SPATA31A7Q8IWB4 1347 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 GOLGA6L10A0A0M3HER8 536 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 E9PMD0 336 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 EIF3DO15371 548 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNF8-210ENST00000511214 ZPR1O75312 459 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 KRT18P05783 430 aaKnown RBP9.9□□□□□ -0.82
SNF8-210ENST00000511214 GAP43P17677 238 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 RFX1P22670 979 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 SLC8A1P32418 973 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 SEC24CP53992 1094 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 PTENP60484 403 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 XRCC4Q13426 336 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 NEDD9Q14511 834 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 ITIH4Q14624 930 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 SNCBQ16143 134 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 SLC15A2Q16348 729 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 ANKRD20A8PQ5CZ79 823 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 NELFCDQ8IXH7 590 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 PLCD3Q8N3E9 789 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 SLC30A5Q8TAD4 765 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 UBLCP1Q8WVY7 318 aaPredicted RBP9.9□□□□□ -0.82
SNF8-210ENST00000511214 RFFLQ8WZ73 363 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 RAPGEF5Q92565 580 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 SGSM3Q96HU1 749 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 SEC16BQ96JE7 1060 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 CCDC114Q96M63 670 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 RUNDC3BQ96NL0 473 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 STMN4Q9H169 189 aaPredicted RBP9.9□□□□□ -0.82
SNF8-210ENST00000511214 RABEP2Q9H5N1 569 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 CCDC134Q9H6E4 229 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 PSTPIP2Q9H939 334 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 CD209Q9NNX6 404 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 SLC40A1Q9NP59 571 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 SIX2Q9NPC8 291 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 PPANQ9NQ55 473 aaKnown RBP9.9□□□□□ -0.82
SNF8-210ENST00000511214 ANKIB1Q9P2G1 1089 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 PARP2Q9UGN5 583 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 CNOT7Q9UIV1 285 aaKnown RBP9.9□□□□□ -0.82
SNF8-210ENST00000511214 RASAL2Q9UJF2 1139 aa9.9□□□□□ -0.82
SNF8-210ENST00000511214 PACSIN2Q9UNF0 486 aaPredicted RBP9.9□□□□□ -0.82
SNF8-210ENST00000511214 FRMPD2Q68DX3 1309 aaPredicted RBP9.89□□□□□ -0.83
SNF8-210ENST00000511214 ZNF335Q9H4Z2 1342 aaPredicted RBP9.89□□□□□ -0.83
SNF8-210ENST00000511214 CCDC169A6NNP5 214 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 ASAP2O43150 1006 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 KIF1CO43896 1103 aaKnown RBP9.89□□□□□ -0.83
SNF8-210ENST00000511214 PPP1R12BO60237 982 aaPredicted RBP9.89□□□□□ -0.83
SNF8-210ENST00000511214 GGPS1O95749 300 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 SSBP05455 408 aaKnown RBP eCLIP9.89□□□□□ -0.83
SNF8-210ENST00000511214 SLC9A1P19634 815 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 DRD4P21917 467 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 RPA1P27694 616 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 HPDP32754 393 aaPredicted RBP9.89□□□□□ -0.83
SNF8-210ENST00000511214 LMNB2Q03252 620 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 ARID5AQ03989 594 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 PPATQ06203 517 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 GIT2Q14161 759 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 TRADDQ15628 312 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 SLC4A8Q2Y0W8 1093 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 KRT71Q3SY84 523 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 Q4G0T1 1027 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 ODF2Q5BJF6 829 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 ARSHQ5FYA8 562 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 ERMARDQ5T6L9 678 aa9.89□□□□□ -0.83
SNF8-210ENST00000511214 BTNL9Q6UXG8 535 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms