RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 EFCAB2Q5VUJ9 269 aa10.07□□□□□ -0.8
USP53-206ENST00000510737 REXO1L1PQ8IX06 675 aa10.07□□□□□ -0.8
USP53-206ENST00000510737 SPATA9Q9BWV2 254 aa10.07□□□□□ -0.8
USP53-206ENST00000510737 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
USP53-206ENST00000510737 AMY2AP04746 511 aa10.06□□□□□ -0.8
USP53-206ENST00000510737 AMY2BP19961 511 aa10.06□□□□□ -0.8
USP53-206ENST00000510737 IGSF5Q9NSI5 407 aa10.06□□□□□ -0.8
USP53-206ENST00000510737 SRPK3Q9UPE1 567 aa10.06□□□□□ -0.8
USP53-206ENST00000510737 TESMINQ9Y4I5 508 aa10.06□□□□□ -0.8
USP53-206ENST00000510737 MYO3AQ8NEV4 1616 aa10.06□□□□□ -0.8
USP53-206ENST00000510737 CPS1P31327 1500 aa10.06□□□□□ -0.8
USP53-206ENST00000510737 ZMYM3Q14202 1370 aa10.05□□□□□ -0.8
USP53-206ENST00000510737 C6orf222P0C671 652 aaPredicted RBP10.05□□□□□ -0.8
USP53-206ENST00000510737 GDF5P43026 501 aa10.05□□□□□ -0.8
USP53-206ENST00000510737 USP10Q14694 798 aaKnown RBP10.05□□□□□ -0.8
USP53-206ENST00000510737 BTBD8Q5XKL5 378 aa10.05□□□□□ -0.8
USP53-206ENST00000510737 KRTAP5-3Q6L8H2 238 aa10.05□□□□□ -0.8
USP53-206ENST00000510737 TAX1BP1Q86VP1 789 aa10.05□□□□□ -0.8
USP53-206ENST00000510737 NEIL1Q96FI4 390 aaPredicted RBP10.05□□□□□ -0.8
USP53-206ENST00000510737 ALG1Q9BT22 464 aa10.05□□□□□ -0.8
USP53-206ENST00000510737 AGLP35573 1532 aa10.05□□□□□ -0.8
USP53-206ENST00000510737 KDM5CP41229 1560 aa10.05□□□□□ -0.8
USP53-206ENST00000510737 MAN2B1O00754 1011 aa10.04□□□□□ -0.8
USP53-206ENST00000510737 WNT9AO14904 365 aa10.04□□□□□ -0.8
USP53-206ENST00000510737 PTPN1P18031 435 aaKnown RBP10.04□□□□□ -0.8
USP53-206ENST00000510737 TOP3AQ13472 1001 aaPredicted RBP10.04□□□□□ -0.8
USP53-206ENST00000510737 NOLC1Q14978 699 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP53-206ENST00000510737 RNF151Q2KHN1 245 aa10.04□□□□□ -0.8
USP53-206ENST00000510737 PCDH19Q8TAB3 1148 aa10.04□□□□□ -0.8
USP53-206ENST00000510737 CBLCQ9ULV8 474 aa10.04□□□□□ -0.8
USP53-206ENST00000510737 ZFR2Q9UPR6 939 aaKnown RBP10.04□□□□□ -0.8
USP53-206ENST00000510737 PCDHA8Q9Y5H6 950 aa10.04□□□□□ -0.8
USP53-206ENST00000510737 NPATQ14207 1427 aa10.04□□□□□ -0.8
USP53-206ENST00000510737 ABCA6Q8N139 1617 aa10.04□□□□□ -0.8
USP53-206ENST00000510737 ESYT3A0FGR9 886 aa10.03□□□□□ -0.8
USP53-206ENST00000510737 POLD1P28340 1107 aa10.03□□□□□ -0.8
USP53-206ENST00000510737 FAM209AQ5JX71 171 aa10.03□□□□□ -0.8
USP53-206ENST00000510737 ARHGAP36Q6ZRI8 547 aa10.03□□□□□ -0.8
USP53-206ENST00000510737 ZNF669Q96BR6 464 aaPredicted RBP10.03□□□□□ -0.8
USP53-206ENST00000510737 CEP170BQ9Y4F5 1589 aaPredicted RBP10.02□□□□□ -0.81
USP53-206ENST00000510737 SUV39H1O43463 412 aa10.02□□□□□ -0.81
USP53-206ENST00000510737 PAK1Q13153 545 aa10.02□□□□□ -0.81
USP53-206ENST00000510737 OSTM1Q86WC4 334 aa10.02□□□□□ -0.81
USP53-206ENST00000510737 PTRH1Q86Y79 214 aaKnown RBP10.02□□□□□ -0.81
USP53-206ENST00000510737 CARD11Q9BXL7 1154 aa10.02□□□□□ -0.81
USP53-206ENST00000510737 PRXQ9BXM0 1461 aa10.02□□□□□ -0.81
USP53-206ENST00000510737 SHANK2Q9UPX8 1470 aa10.02□□□□□ -0.81
USP53-206ENST00000510737 NEURL4Q96JN8 1562 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 PTPRKQ15262 1439 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 CNTLNQ9NXG0 1405 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 CYR61O00622 381 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 FZD7O75084 574 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 PYGMP11217 842 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 PDE6AP16499 860 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 GPR19Q15760 415 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 IFNL2Q8IZJ0 200 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 FUKQ8N0W3 1084 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 MRIQ9BWK5 157 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 SEMA4AQ9H3S1 761 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 RIC8BQ9NVN3 520 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 PFDN2Q9UHV9 154 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 MROH2AA6NES4 1674 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 SAMD9Q5K651 1589 aa10.01□□□□□ -0.81
USP53-206ENST00000510737 MATN2O00339 956 aa10□□□□□ -0.81
USP53-206ENST00000510737 HMGA2P52926 109 aa10□□□□□ -0.81
USP53-206ENST00000510737 JAM2P57087 298 aa10□□□□□ -0.81
USP53-206ENST00000510737 KLF10Q13118 480 aa10□□□□□ -0.81
USP53-206ENST00000510737 TBR1Q16650 682 aa10□□□□□ -0.81
USP53-206ENST00000510737 Q6ZSN1 163 aa10□□□□□ -0.81
USP53-206ENST00000510737 GIMAP8Q8ND71 665 aaPredicted RBP10□□□□□ -0.81
USP53-206ENST00000510737 TRIM55Q9BYV6 548 aa10□□□□□ -0.81
USP53-206ENST00000510737 HS3ST3A1Q9Y663 406 aa10□□□□□ -0.81
USP53-206ENST00000510737 ZNF518AQ6AHZ1 1483 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 ARVCFO00192 962 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 KCNK3O14649 394 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 PLSCR1O15162 318 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 PDPK1O15530 556 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 DIAPH1O60610 1272 aaKnown RBP9.99□□□□□ -0.81
USP53-206ENST00000510737 RANGAP1P46060 587 aaPredicted RBP9.99□□□□□ -0.81
USP53-206ENST00000510737 RRADP55042 308 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 IL13RA1P78552 427 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 SEC23AQ15436 765 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 MAMDC2Q7Z304 686 aaPredicted RBP9.99□□□□□ -0.81
USP53-206ENST00000510737 MTDHQ86UE4 582 aaKnown RBP9.99□□□□□ -0.81
USP53-206ENST00000510737 SCUBE1Q8IWY4 988 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 PTPRN2Q92932 1015 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 EXOC2Q96KP1 924 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 PCED1AQ9H1Q7 454 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 BTBD7Q9P203 1132 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 ING1Q9UK53 422 aaPredicted RBP9.99□□□□□ -0.81
USP53-206ENST00000510737 VWDEQ8N2E2 1590 aa9.99□□□□□ -0.81
USP53-206ENST00000510737 SUPT6HQ7KZ85 1726 aaKnown RBP9.99□□□□□ -0.81
USP53-206ENST00000510737 TRBV23-1A0A0A0MS06 115 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 AQP7O14520 342 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 C4BPAP04003 597 aaKnown RBP9.98□□□□□ -0.81
USP53-206ENST00000510737 MC4RP32245 332 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 DUSP8Q13202 625 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 AGBL4Q5VU57 503 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 IGFL4Q6B9Z1 124 aa9.98□□□□□ -0.81
USP53-206ENST00000510737 DPH6Q7L8W6 267 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms