RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 WDR64B1ANS9 1081 aa20.28■□□□□ 0.84
TPM3-220ENST00000509601 CDKL5O76039 1030 aa20.28■□□□□ 0.84
TPM3-220ENST00000509601 C22orf31O95567 290 aa20.28■□□□□ 0.84
TPM3-220ENST00000509601 ANKRD1Q15327 319 aa20.28■□□□□ 0.84
TPM3-220ENST00000509601 ME3Q16798 604 aa20.28■□□□□ 0.84
TPM3-220ENST00000509601 TRMT1LQ7Z2T5 733 aaKnown RBP20.28■□□□□ 0.84
TPM3-220ENST00000509601 CKAP2LQ8IYA6 745 aa20.28■□□□□ 0.84
TPM3-220ENST00000509601 NECAB1Q8N987 351 aa20.28■□□□□ 0.84
TPM3-220ENST00000509601 ASB2Q96Q27 587 aa20.28■□□□□ 0.84
TPM3-220ENST00000509601 YME1L1Q96TA2 773 aa20.28■□□□□ 0.84
TPM3-220ENST00000509601 LOXHD1Q8IVV2 1947 aa20.27■□□□□ 0.84
TPM3-220ENST00000509601 LARGE1O95461 756 aa20.27■□□□□ 0.84
TPM3-220ENST00000509601 MRPS5P82675 430 aaKnown RBP20.27■□□□□ 0.84
TPM3-220ENST00000509601 NONOQ15233 471 aaKnown RBP eCLIP20.27■□□□□ 0.841e-7■■■■□ 26.2
TPM3-220ENST00000509601 INF2Q27J81 1249 aa20.27■□□□□ 0.84
TPM3-220ENST00000509601 EPC2Q52LR7 807 aa20.27■□□□□ 0.84
TPM3-220ENST00000509601 MOXD1Q6UVY6 613 aa20.27■□□□□ 0.84
TPM3-220ENST00000509601 TEKT3Q9BXF9 490 aa20.27■□□□□ 0.84
TPM3-220ENST00000509601 TMX1Q9H3N1 280 aa20.27■□□□□ 0.84
TPM3-220ENST00000509601 RC3H2Q9HBD1 1191 aaKnown RBP20.27■□□□□ 0.84
TPM3-220ENST00000509601 SAMM50Q9Y512 469 aa20.27■□□□□ 0.84
TPM3-220ENST00000509601 MUC3AQ02505 3323 aa20.27■□□□□ 0.83
TPM3-220ENST00000509601 WDR81Q562E7 1941 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 M0QZ92 97 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 GAS7O60861 476 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 LINC00271P0C7V0 271 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 LRCH2Q5VUJ6 765 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 KRT25Q7Z3Z0 450 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 TMEM192Q8IY95 271 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 LINC01465Q8N7H1 131 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 ETNPPLQ8TBG4 499 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 OXER1Q8TDS5 423 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 SYMPKQ92797 1274 aaKnown RBP20.26■□□□□ 0.83
TPM3-220ENST00000509601 ZNF689Q96CS4 500 aaPredicted RBP20.26■□□□□ 0.83
TPM3-220ENST00000509601 FTHL17Q9BXU8 183 aa20.26■□□□□ 0.83
TPM3-220ENST00000509601 ORC3Q9UBD5 711 aaPredicted RBP20.26■□□□□ 0.83
TPM3-220ENST00000509601 NOC2LQ9Y3T9 749 aaKnown RBP20.26■□□□□ 0.83
TPM3-220ENST00000509601 CHMP2AO43633 222 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 STBD1O95210 358 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 SFNP31947 248 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 NEK4P51957 841 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 UGCGQ16739 394 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 TMEM266Q2M3C6 531 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 FBXO22Q8NEZ5 403 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 TMEM40Q8WWA1 233 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 SAMD11Q96NU1 681 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 TSPYL2Q9H2G4 693 aaPredicted RBP20.25■□□□□ 0.83
TPM3-220ENST00000509601 ERVK-5Q9HDB9 667 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 NRBP2Q9NSY0 501 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 TCEAL9Q9UHQ7 104 aa20.25■□□□□ 0.83
TPM3-220ENST00000509601 H3BNC9 293 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 MAGEB2O15479 319 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 GPR32O75388 356 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 DGKIO75912 1065 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 OATP04181 439 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 JAK3P52333 1124 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 TFF2Q03403 129 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 PAK2Q13177 524 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 SKIV2LQ15477 1246 aaKnown RBP20.24■□□□□ 0.83
TPM3-220ENST00000509601 EARS2Q5JPH6 523 aaKnown RBP20.24■□□□□ 0.83
TPM3-220ENST00000509601 GTF3C6Q969F1 213 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 FAM167AQ96KS9 214 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 DDX25Q9UHL0 483 aaKnown RBP20.24■□□□□ 0.83
TPM3-220ENST00000509601 CEP131Q9UPN4 1083 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 GINS2Q9Y248 185 aa20.24■□□□□ 0.83
TPM3-220ENST00000509601 SLC37A4O43826 429 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 EIF5BO60841 1220 aaKnown RBP20.23■□□□□ 0.83
TPM3-220ENST00000509601 CRYBB1P53674 252 aaPredicted RBP20.23■□□□□ 0.83
TPM3-220ENST00000509601 NFX1Q12986 1120 aaKnown RBP20.23■□□□□ 0.83
TPM3-220ENST00000509601 TARBP2Q15633 366 aaKnown RBP20.23■□□□□ 0.83
TPM3-220ENST00000509601 LETM2Q2VYF4 491 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 PPP4R3AQ6IN85 833 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 EFCAB12Q6NXP0 572 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 MIER3Q7Z3K6 550 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 FIBCD1Q8N539 461 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 METTL13Q8N6R0 699 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 RDM1Q8NG50 284 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 BRWD1Q9NSI6 2320 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 ST3GAL5Q9UNP4 418 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 MYO7AQ13402 2215 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 NCOR1O75376 2440 aa20.23■□□□□ 0.83
TPM3-220ENST00000509601 CCDC194A0A1B0GVG4 234 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 MGEA5O60502 916 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 RPS6KA5O75582 802 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 VTNP04004 478 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 BMP1P13497 986 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 XBP1P17861 261 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 PRKCEQ02156 737 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 GPM6BQ13491 265 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 KIZQ2M2Z5 673 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 PIK3AP1Q6ZUJ8 805 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 NEK8Q86SG6 692 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 NSUN7Q8NE18 718 aaKnown RBP20.22■□□□□ 0.83
TPM3-220ENST00000509601 CEP89Q96ST8 783 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 PPP1R16BQ96T49 567 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 NIFKQ9BYG3 293 aaKnown RBP20.22■□□□□ 0.83
TPM3-220ENST00000509601 KCNMB3Q9NPA1 279 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 COG5Q9UP83 839 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 COL4A6Q14031 1691 aa20.22■□□□□ 0.83
TPM3-220ENST00000509601 EML1O00423 815 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms