RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 POTEBQ6S5H4 581 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 NT5DC3Q86UY8 548 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 CATSPER3Q86XQ3 398 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 DDX4Q9NQI0 724 aaKnown RBP10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 FAM114A2Q9NRY5 505 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 USP17L10C9JJH3 530 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 EYA4O95677 639 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 HSD17B3P37058 310 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 EIF3BP55884 814 aaKnown RBP10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 VPS36Q86VN1 386 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 ZNF473Q8WTR7 871 aaKnown RBP10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 FAM129AQ9BZQ8 928 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 KCND2Q9NZV8 630 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 SEL1LQ9UBV2 794 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 PPFIA2O75334 1257 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 KRT14P02533 472 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 H2AFZP0C0S5 128 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 XRCC5P13010 732 aaKnown RBP10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 MATR3P43243 847 aaKnown RBP eCLIP10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 ZNF131P52739 623 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 HDLBPQ00341 1268 aaKnown RBP10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 QRICH1Q2TAL8 776 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 H2AFVQ71UI9 128 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 MAATS1Q7Z4T9 603 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 SLC9A9Q8IVB4 645 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 METTL13Q8N6R0 699 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 MYCBPAPQ8TBZ2 947 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 CARD9Q9H257 536 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 TUFT1Q9NNX1 390 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 DMAC2Q9NW81 257 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 DNM3Q9UQ16 869 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 PLAAQ9Y263 795 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 DDX3XO00571 662 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 NDUFAB1O14561 156 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 PMM2O15305 246 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 LMNB1P20700 586 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 INPP5BP32019 993 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 USP8P40818 1118 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 ARHGAP4P98171 946 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 ZNF844Q08AG5 666 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 PDCLQ13371 301 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 PPP2R5AQ15172 486 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 TTBK2Q6IQ55 1244 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 TATDN1Q6P1N9 297 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 RPAINQ86UA6 219 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 NLRP14Q86W24 1093 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 CCDC26Q8TAB7 109 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 TLCD1Q96CP7 247 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 REEP2Q9BRK0 252 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 TMEM109Q9BVC6 243 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 STK33Q9BYT3 514 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 NOC2LQ9Y3T9 749 aaKnown RBP10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 ZMYM2Q9UBW7 1377 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 ADAMTSL1Q8N6G6 1762 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 FAM187AA6NFU0 413 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 SART1O43290 800 aaKnown RBP10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 AKAP3O75969 853 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 NR3C1P04150 777 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 HLA-DOAP06340 250 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 NUDT17P0C025 328 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 SLC9A1P19634 815 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 GBP1P32455 592 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 CASP5P51878 434 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 KAT2BQ92831 832 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 PSMB7Q99436 277 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 TACO1Q9BSH4 297 aaKnown RBP10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 STRA6Q9BX79 667 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 IDI2Q9BXS1 227 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 SPATA31A6Q5VVP1 1343 aa10.07□□□□□ -0.8
PDGFRA-208ENST00000509490 ZSCAN5CA6NGD5 496 aaPredicted RBP10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 GCOM1H8Y6P7 765 aaPredicted RBP10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 KCNK3O14649 394 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 DDX3YO15523 660 aaKnown RBP10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 TRAPPC3O43617 180 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 MYZAPP0CAP1 466 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 HSPA6P17066 643 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 STAT1P42224 750 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 PTENP60484 403 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 FAM98CQ17RN3 349 aaKnown RBP10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 LACTB2Q53H82 288 aaPredicted RBP10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 PTF1AQ7RTS3 328 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 TMC3Q7Z5M5 1100 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 IPO4Q8TEX9 1081 aaKnown RBP10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 RFFLQ8WZ73 363 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 CCT8L2Q96SF2 557 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 ACTR5Q9H9F9 607 aaPredicted RBP10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 KANSL2Q9H9L4 492 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 MTMR7Q9Y216 660 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 RGPD3A6NKT7 1758 aaPredicted RBP10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 RGPD4Q7Z3J3 1758 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 TGFB1I1O43294 461 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 MTA2O94776 668 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 GYS1P13807 737 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 EPS15P42566 896 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 TRAF1Q13077 416 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 APOBEC3HQ6NTF7 200 aaKnown RBP10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 CROCCP2Q86T23 111 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 SLC51AQ86UW1 340 aa10.06□□□□□ -0.8
PDGFRA-208ENST00000509490 SFR1Q86XK3 245 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms