RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 KCNQ1P51787 676 aa10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 MRPL12P52815 198 aaKnown RBP10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 RBL2Q08999 1139 aa10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 ZNF543Q08ER8 600 aa10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 BFSP2Q13515 415 aa10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 MICALL1Q8N3F8 863 aa10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 CAGE1Q8TC20 777 aa10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 COPS5Q92905 334 aa10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 EVI5LQ96CN4 794 aa10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 MPHOSPH6Q99547 160 aaKnown RBP10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 CERS4Q9HA82 394 aa10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 LMCD1Q9NZU5 365 aa10.09□□□□□ -0.79
COL4A3BP-206ENST00000508809 ZMYM6O95789 1325 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 FRMPD2Q68DX3 1309 aaPredicted RBP10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 LGR5O75473 907 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 ARIH2O95376 493 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 PARNO95453 639 aaKnown RBP10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 HSPD1P10809 573 aaKnown RBP10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 PCP11498 1178 aaKnown RBP10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 CD33P20138 364 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 CTBSQ01459 385 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 GRB10Q13322 594 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 RTN1Q16799 776 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 MCMDC2Q4G0Z9 681 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 FAM47CQ5HY64 1035 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 KRT40Q6A162 431 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 CCDC82Q8N4S0 544 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 AFAP1L1Q8TED9 768 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 ARNTL2Q8WYA1 636 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 KAT2BQ92831 832 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 CEP63Q96MT8 703 aa10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 FTOQ9C0B1 505 aaKnown RBP eCLIP10.08□□□□□ -0.8
COL4A3BP-206ENST00000508809 MYH6P13533 1939 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 CXCL10P02778 98 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 ARAFP10398 606 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 WEE1P30291 646 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 PTGISQ16647 500 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 RRP12Q5JTH9 1297 aaKnown RBP10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 GPATCH4Q5T3I0 446 aaKnown RBP10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 PPP1R13LQ8WUF5 828 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 AFG1LQ8WV93 481 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 TBC1D5Q92609 795 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 FAM122AQ96E09 287 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 SCARF2Q96GP6 870 aaPredicted RBP10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 EPHX3Q9H6B9 360 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 AVENQ9NQS1 362 aaPredicted RBP10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 PIEZO1Q92508 2521 aa10.07□□□□□ -0.8
COL4A3BP-206ENST00000508809 A0A0D9SFI3 127 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 OIP5O43482 229 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 MMP3P08254 477 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 SELPP16109 830 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 CASTP20810 708 aaKnown RBP10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 ADH6P28332 368 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 NT5C2P49902 561 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 PDE1AP54750 535 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 WDR5P61964 334 aaKnown RBP10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 ARHGAP1Q07960 439 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 LY6KQ17RY6 165 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 GDF6Q6KF10 455 aaPredicted RBP10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 SPRED2Q7Z698 418 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 DGKHQ86XP1 1220 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 SYTL5Q8TDW5 730 aaPredicted RBP10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 DHX38Q92620 1227 aaKnown RBP10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 ANKS1AQ92625 1134 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 SUSD3Q96L08 255 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 FAM227BQ96M60 508 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 IWS1Q96ST2 819 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 LRFN3Q9BTN0 628 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 TOMM22Q9NS69 142 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 DDX41Q9UJV9 622 aaKnown RBP10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 MUC6Q6W4X9 2439 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 MYO7AQ13402 2215 aa10.06□□□□□ -0.8
COL4A3BP-206ENST00000508809 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 ABHD14A-ACY1A0A1B0GW23 586 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 LCHNA4D1U4 455 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 HAS3O00219 553 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 EFSO43281 561 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 NBNO60934 754 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 GJB5O95377 273 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 GH1P01241 217 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 CKBP12277 381 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 KCNJ6P48051 423 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 ERVK-21P61565 698 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 STXBP2Q15833 593 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 ANKRD45Q5TZF3 282 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 CNKSR3Q6P9H4 555 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 SLCO4C1Q6ZQN7 724 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 MFSD6Q6ZSS7 791 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 ZNF589Q86UQ0 364 aaPredicted RBP10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 NSUN6Q8TEA1 469 aaKnown RBP10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 HSH2DQ96JZ2 352 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 TAAR1Q96RJ0 339 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 RAD9AQ99638 391 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 UBA5Q9GZZ9 404 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 SUGCTQ9HAC7 445 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 BRD7Q9NPI1 651 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 COL20A1Q9P218 1284 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 GTF2IRD1Q9UHL9 959 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 ZMIZ1Q9ULJ6 1067 aa10.05□□□□□ -0.8
COL4A3BP-206ENST00000508809 MICAL3Q7RTP6 2002 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms