RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ITGB5P18084 799 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 GATMP50440 423 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 ERVFC1P60507 584 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 IGBP1P78318 339 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 RBM10P98175 930 aaKnown RBP10.78□□□□□ -0.68
NEDD9-211ENST00000508546 TRDNQ13061 729 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 ASTLQ6HA08 431 aaPredicted RBP10.78□□□□□ -0.68
NEDD9-211ENST00000508546 ANKRD54Q6NXT1 300 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 PLEKHM2Q8IWE5 1019 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 NME8Q8N427 588 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 KREMEN2Q8NCW0 462 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 PCYT2Q99447 389 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 MAP3K14Q99558 947 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 TMX1Q9H3N1 280 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 LZTS1Q9Y250 596 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 PCDHB7Q9Y5E2 793 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 UBIAD1Q9Y5Z9 338 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 ZFYVE26Q68DK2 2539 aa10.78□□□□□ -0.68
NEDD9-211ENST00000508546 SMIM35A0A1B0GVV1 85 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 IFIT3O14879 490 aaKnown RBP10.77□□□□□ -0.69
NEDD9-211ENST00000508546 LMNAP02545 664 aaKnown RBP10.77□□□□□ -0.69
NEDD9-211ENST00000508546 SMARCA1P28370 1054 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 KRT76Q01546 638 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 MTMR1Q13613 665 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 WTAPQ15007 396 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 ACAP1Q15027 740 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 RSPO4Q2I0M5 234 aaPredicted RBP10.77□□□□□ -0.69
NEDD9-211ENST00000508546 SPOUT1Q5T280 376 aaKnown RBP10.77□□□□□ -0.69
NEDD9-211ENST00000508546 SYCE2Q6PIF2 218 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 SMC5Q8IY18 1101 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 UBALD2Q8IYN6 164 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 COLGALT1Q8NBJ5 622 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 KCNG4Q8TDN1 519 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 ZBTB10Q96DT7 871 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 ERVK-5Q9HDB9 667 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 C1orf112Q9NSG2 853 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 NR2E1Q9Y466 385 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 FANCMQ8IYD8 2048 aa10.77□□□□□ -0.69
NEDD9-211ENST00000508546 C9IYK1 514 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 MGEA5O60502 916 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 TECP42680 631 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 PLCB3Q01970 1234 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 TMEM62Q0P6H9 643 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 NFX1Q12986 1120 aaKnown RBP10.76□□□□□ -0.69
NEDD9-211ENST00000508546 MTMR3Q13615 1198 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 SART3Q15020 963 aaKnown RBP10.76□□□□□ -0.69
NEDD9-211ENST00000508546 ANGPT1Q15389 498 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 ODR4Q5SWX8 454 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 SLC24A5Q71RS6 500 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 PLPPR4Q7Z2D5 763 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 CATIPQ7Z7H3 387 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 THNSL1Q8IYQ7 743 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 PIBF1Q8WXW3 757 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 RRP36Q96EU6 259 aaKnown RBP10.76□□□□□ -0.69
NEDD9-211ENST00000508546 IL25Q9H293 177 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 AZI2Q9H6S1 392 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 CWH43Q9H720 699 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 JPH1Q9HDC5 661 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-211ENST00000508546 JADE2Q9NQC1 790 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 RGS18Q9NS28 235 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 TYW1Q9NV66 732 aaKnown RBP10.76□□□□□ -0.69
NEDD9-211ENST00000508546 TMEM260Q9NX78 707 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 SLC9A2Q9UBY0 812 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 SORCS3Q9UPU3 1222 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-211ENST00000508546 DENND4AQ7Z401 1863 aa10.76□□□□□ -0.69
NEDD9-211ENST00000508546 TBKBP1A7MCY6 615 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 CYP21A2P08686 494 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 LAG3P18627 525 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 FAM189BP81408 668 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 PLCB4Q15147 1175 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 TMEM266Q2M3C6 531 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 FAM102BQ5T8I3 360 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 MTHFD1LQ6UB35 978 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 CHD1LQ86WJ1 897 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 CCDC105Q8IYK2 499 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 TRAPPC12Q8WVT3 735 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 MRPS27Q92552 414 aaKnown RBP10.75□□□□□ -0.69
NEDD9-211ENST00000508546 NECTIN4Q96NY8 510 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 ADAM2Q99965 735 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 HINFPQ9BQA5 517 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 ELAC1Q9H777 363 aaKnown RBP10.75□□□□□ -0.69
NEDD9-211ENST00000508546 PSTPIP2Q9H939 334 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 NGRNQ9NPE2 291 aaKnown RBP10.75□□□□□ -0.69
NEDD9-211ENST00000508546 SEC63Q9UGP8 760 aaKnown RBP10.75□□□□□ -0.69
NEDD9-211ENST00000508546 PUF60Q9UHX1 559 aaKnown RBP10.75□□□□□ -0.69
NEDD9-211ENST00000508546 R4GN57 208 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 NFASCO94856 1347 aa10.75□□□□□ -0.69
NEDD9-211ENST00000508546 DENND3A2RUS2 1198 aa10.74□□□□□ -0.69
NEDD9-211ENST00000508546 GPR182O15218 404 aa10.74□□□□□ -0.69
NEDD9-211ENST00000508546 RPS6KA5O75582 802 aa10.74□□□□□ -0.69
NEDD9-211ENST00000508546 KIF5BP33176 963 aa10.74□□□□□ -0.69
NEDD9-211ENST00000508546 GNAQP50148 359 aa10.74□□□□□ -0.69
NEDD9-211ENST00000508546 SLC26A2P50443 739 aa10.74□□□□□ -0.69
NEDD9-211ENST00000508546 STAT5BP51692 787 aa10.74□□□□□ -0.69
NEDD9-211ENST00000508546 ITIH3Q06033 890 aa10.74□□□□□ -0.69
NEDD9-211ENST00000508546 AAMPQ13685 434 aa10.74□□□□□ -0.69
NEDD9-211ENST00000508546 TPRNQ4KMQ1 711 aa10.74□□□□□ -0.69
NEDD9-211ENST00000508546 PLPP4Q5VZY2 271 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms