RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 IL17RAQ96F46 866 aa18.38■□□□□ 0.53
LMNA-222ENST00000508500 SAMD11Q96NU1 681 aa18.38■□□□□ 0.53
LMNA-222ENST00000508500 PDRG1Q9NUG6 133 aa18.38■□□□□ 0.53
LMNA-222ENST00000508500 PCDHA4Q9UN74 947 aa18.38■□□□□ 0.53
LMNA-222ENST00000508500 ZNF862O60290 1169 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 DGKIO75912 1065 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 DEXIO95424 95 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 C22orf31O95567 290 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 USP11P51784 963 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 KRT76Q01546 638 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 SCRN1Q12765 414 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 GPM6BQ13491 265 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 TMEM266Q2M3C6 531 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 TRMT1LQ7Z2T5 733 aaKnown RBP18.37■□□□□ 0.53
LMNA-222ENST00000508500 SMAP1Q8IYB5 467 aaPredicted RBP18.37■□□□□ 0.53
LMNA-222ENST00000508500 TBCKQ8TEA7 893 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 SLC5A5Q92911 643 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 KHSRPQ92945 711 aaKnown RBP eCLIP18.37■□□□□ 0.53
LMNA-222ENST00000508500 GABBR1Q9UBS5 961 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 PCDHA10Q9Y5I2 948 aa18.37■□□□□ 0.53
LMNA-222ENST00000508500 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.36■□□□□ 0.53
LMNA-222ENST00000508500 TDP2O95551 362 aa18.36■□□□□ 0.53
LMNA-222ENST00000508500 ADGRA3Q8IWK6 1321 aa18.36■□□□□ 0.53
LMNA-222ENST00000508500 TRIM22Q8IYM9 498 aa18.36■□□□□ 0.53
LMNA-222ENST00000508500 BLIDQ8IZY5 108 aa18.36■□□□□ 0.53
LMNA-222ENST00000508500 FIBCD1Q8N539 461 aa18.36■□□□□ 0.53
LMNA-222ENST00000508500 DAGLBQ8NCG7 672 aa18.36■□□□□ 0.53
LMNA-222ENST00000508500 BBXQ8WY36 941 aaPredicted RBP18.36■□□□□ 0.53
LMNA-222ENST00000508500 C1QTNF1Q9BXJ1 281 aa18.36■□□□□ 0.53
LMNA-222ENST00000508500 EPHX3Q9H6B9 360 aa18.36■□□□□ 0.53
LMNA-222ENST00000508500 ERVK-5Q9HDB9 667 aa18.36■□□□□ 0.53
LMNA-222ENST00000508500 C11orf16Q9NQ32 467 aa18.36■□□□□ 0.53
LMNA-222ENST00000508500 NOC2LQ9Y3T9 749 aaKnown RBP18.36■□□□□ 0.53
LMNA-222ENST00000508500 C5orf67F2Z3F1 127 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 MGEA5O60502 916 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 PSAPP07602 524 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 PLA2G5P39877 138 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 UGCGQ16739 394 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 B3GNT9Q6UX72 402 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 LINC01465Q8N7H1 131 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 CLP1Q92989 425 aaKnown RBP18.35■□□□□ 0.53
LMNA-222ENST00000508500 MRPL38Q96DV4 380 aaKnown RBP18.35■□□□□ 0.53
LMNA-222ENST00000508500 MBOAT7Q96N66 472 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 UNC45AQ9H3U1 944 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 CD320Q9NPF0 282 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 GJB4Q9NTQ9 266 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 TPCN1Q9ULQ1 816 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 KCNJ14Q9UNX9 436 aa18.35■□□□□ 0.53
LMNA-222ENST00000508500 CYP3A7-CYP3A51PA0A087WV96 503 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 M0QZ92 97 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 CPLX1O14810 134 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 PSMD10O75832 226 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 CTDNEP1O95476 244 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 CYP3A7P24462 503 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 BMPR1AP36894 532 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 GATMP50440 423 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 PAK2Q13177 524 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 Q4G0T1 1027 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 CKAP2LQ8IYA6 745 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 PPP1R16BQ96T49 567 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 RIT2Q99578 217 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 FTHL17Q9BXU8 183 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 DISC1Q9NRI5 854 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 GINS2Q9Y248 185 aa18.34■□□□□ 0.53
LMNA-222ENST00000508500 WDR64B1ANS9 1081 aa18.33■□□□□ 0.52
LMNA-222ENST00000508500 GRM6O15303 877 aa18.33■□□□□ 0.52
LMNA-222ENST00000508500 GPR32O75388 356 aa18.33■□□□□ 0.52
LMNA-222ENST00000508500 VTNP04004 478 aa18.33■□□□□ 0.52
LMNA-222ENST00000508500 CTNNB1P35222 781 aa18.33■□□□□ 0.52
LMNA-222ENST00000508500 KIZQ2M2Z5 673 aa18.33■□□□□ 0.52
LMNA-222ENST00000508500 UBE2ZQ9H832 354 aaPredicted RBP18.33■□□□□ 0.52
LMNA-222ENST00000508500 SAMM50Q9Y512 469 aa18.33■□□□□ 0.52
LMNA-222ENST00000508500 CHMP2AO43633 222 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 PFKFB2O60825 505 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 RPS6KA5O75582 802 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 STBD1O95210 358 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 CLCN3P51790 818 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 AK2P54819 239 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 NFX1Q12986 1120 aaKnown RBP18.32■□□□□ 0.52
LMNA-222ENST00000508500 BTG3Q14201 252 aaPredicted RBP18.32■□□□□ 0.52
LMNA-222ENST00000508500 COL19A1Q14993 1142 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 LRCH2Q5VUJ6 765 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 FAM228AQ86W67 206 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 NPAS4Q8IUM7 802 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 ETNPPLQ8TBG4 499 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 OSMRQ99650 979 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 LRFN3Q9BTN0 628 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 PHF20Q9BVI0 1012 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 TEKT3Q9BXF9 490 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 ST3GAL5Q9UNP4 418 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 ARIH1Q9Y4X5 557 aaPredicted RBP18.32■□□□□ 0.52
LMNA-222ENST00000508500 MRPL42Q9Y6G3 142 aaKnown RBP18.32■□□□□ 0.52
LMNA-222ENST00000508500 ARID2Q68CP9 1835 aa18.32■□□□□ 0.52
LMNA-222ENST00000508500 GAS7O60861 476 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 LARGE1O95461 756 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 OATP04181 439 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 RB1P06400 928 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 PRKCEQ02156 737 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 CAMK1Q14012 370 aa18.31■□□□□ 0.52
LMNA-222ENST00000508500 INF2Q27J81 1249 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms