RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 PPME1Q9Y570 386 aa22.36■■□□□ 1.17
SFXN1-209ENST00000508290 ZNF862O60290 1169 aa22.35■■□□□ 1.17
SFXN1-209ENST00000508290 NEMFO60524 1076 aa22.35■■□□□ 1.17
SFXN1-209ENST00000508290 GHRP10912 638 aa22.35■■□□□ 1.17
SFXN1-209ENST00000508290 RABGGTBP53611 331 aa22.35■■□□□ 1.17
SFXN1-209ENST00000508290 MAP7D2Q96T17 732 aa22.35■■□□□ 1.17
SFXN1-209ENST00000508290 NIFKQ9BYG3 293 aaKnown RBP22.35■■□□□ 1.17
SFXN1-209ENST00000508290 DTNBO60941 627 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 P4HBP07237 508 aaKnown RBP22.34■■□□□ 1.17
SFXN1-209ENST00000508290 CA3P07451 260 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 FOSL2P15408 326 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 QARSP47897 775 aaKnown RBP22.34■■□□□ 1.17
SFXN1-209ENST00000508290 TRAPPC10P48553 1259 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 DEFB103AP81534 67 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 CDC42EP1Q00587 391 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 GNL2Q13823 731 aaKnown RBP22.34■■□□□ 1.17
SFXN1-209ENST00000508290 GRIN2CQ14957 1233 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 EPHA7Q15375 998 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 CALCRLQ16602 461 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 POTEDQ86YR6 584 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 EXOC8Q8IYI6 725 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 KIAA0319LQ8IZA0 1049 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 HAS1Q92839 578 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 GAS2L1Q99501 681 aaPredicted RBP22.34■■□□□ 1.17
SFXN1-209ENST00000508290 JPH2Q9BR39 696 aaPredicted RBP22.34■■□□□ 1.17
SFXN1-209ENST00000508290 RNF216Q9NWF9 866 aaPredicted RBP22.34■■□□□ 1.17
SFXN1-209ENST00000508290 INSL6Q9Y581 213 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 TET1Q8NFU7 2136 aa22.34■■□□□ 1.17
SFXN1-209ENST00000508290 TBC1D8BQ0IIM8 1120 aa22.33■■□□□ 1.17
SFXN1-209ENST00000508290 TCTN1Q2MV58 587 aa22.33■■□□□ 1.17
SFXN1-209ENST00000508290 METTL13Q8N6R0 699 aa22.33■■□□□ 1.17
SFXN1-209ENST00000508290 NEK9Q8TD19 979 aa22.33■■□□□ 1.17
SFXN1-209ENST00000508290 GJA10Q969M2 543 aa22.33■■□□□ 1.17
SFXN1-209ENST00000508290 TMX3Q96JJ7 454 aa22.33■■□□□ 1.17
SFXN1-209ENST00000508290 PCDHA12Q9UN75 941 aa22.33■■□□□ 1.17
SFXN1-209ENST00000508290 FAM205CA6NFA0 338 aa22.32■■□□□ 1.16
SFXN1-209ENST00000508290 CRYBB1P53674 252 aaPredicted RBP22.32■■□□□ 1.16
SFXN1-209ENST00000508290 PAK2Q13177 524 aa22.32■■□□□ 1.16
SFXN1-209ENST00000508290 TARBP2Q15633 366 aaKnown RBP22.32■■□□□ 1.16
SFXN1-209ENST00000508290 UGCGQ16739 394 aa22.32■■□□□ 1.16
SFXN1-209ENST00000508290 NOSTRINQ8IVI9 506 aa22.32■■□□□ 1.16
SFXN1-209ENST00000508290 MYOCDQ8IZQ8 938 aa22.32■■□□□ 1.16
SFXN1-209ENST00000508290 MYLIPQ8WY64 445 aa22.32■■□□□ 1.16
SFXN1-209ENST00000508290 TOP1MTQ969P6 601 aa22.32■■□□□ 1.16
SFXN1-209ENST00000508290 SEPT9Q9UHD8 586 aaPredicted RBP22.32■■□□□ 1.16
SFXN1-209ENST00000508290 NOL7Q9UMY1 257 aaKnown RBP22.32■■□□□ 1.16
SFXN1-209ENST00000508290 DNM2P50570 870 aa22.31■■□□□ 1.16
SFXN1-209ENST00000508290 FOSBP53539 338 aa22.31■■□□□ 1.16
SFXN1-209ENST00000508290 GUCY1B3Q02153 619 aa22.31■■□□□ 1.16
SFXN1-209ENST00000508290 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.31■■□□□ 1.169e-7■■■■□ 19.3
SFXN1-209ENST00000508290 ZBTB10Q96DT7 871 aa22.31■■□□□ 1.16
SFXN1-209ENST00000508290 BACH2Q9BYV9 841 aa22.31■■□□□ 1.16
SFXN1-209ENST00000508290 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.31■■□□□ 1.16
SFXN1-209ENST00000508290 COL4A6Q14031 1691 aa22.3■■□□□ 1.16
SFXN1-209ENST00000508290 GPR182O15218 404 aa22.3■■□□□ 1.16
SFXN1-209ENST00000508290 MYOGP15173 224 aa22.3■■□□□ 1.16
SFXN1-209ENST00000508290 HTRA4P83105 476 aaPredicted RBP22.3■■□□□ 1.16
SFXN1-209ENST00000508290 SPIRE1Q08AE8 756 aa22.3■■□□□ 1.16
SFXN1-209ENST00000508290 TMEM62Q0P6H9 643 aa22.3■■□□□ 1.16
SFXN1-209ENST00000508290 EFCAB12Q6NXP0 572 aa22.3■■□□□ 1.16
SFXN1-209ENST00000508290 OTUD6AQ7L8S5 288 aa22.3■■□□□ 1.16
SFXN1-209ENST00000508290 TRMT1LQ7Z2T5 733 aaKnown RBP22.3■■□□□ 1.16
SFXN1-209ENST00000508290 C4orf19Q8IY42 314 aa22.3■■□□□ 1.16
SFXN1-209ENST00000508290 LINC01465Q8N7H1 131 aa22.3■■□□□ 1.16
SFXN1-209ENST00000508290 ZSWIM4Q9H7M6 989 aa22.3■■□□□ 1.16
SFXN1-209ENST00000508290 MYH9P35579 1960 aaKnown RBP22.29■■□□□ 1.16
SFXN1-209ENST00000508290 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.29■■□□□ 1.16
SFXN1-209ENST00000508290 EML1O00423 815 aa22.29■■□□□ 1.16
SFXN1-209ENST00000508290 U2AF2P26368 475 aaKnown RBP eCLIP22.29■■□□□ 1.16
SFXN1-209ENST00000508290 TAP1Q03518 808 aa22.29■■□□□ 1.16
SFXN1-209ENST00000508290 BANK1Q8NDB2 785 aa22.29■■□□□ 1.16
SFXN1-209ENST00000508290 MTMR9Q96QG7 549 aa22.29■■□□□ 1.16
SFXN1-209ENST00000508290 TTC12Q9H892 705 aaPredicted RBP22.29■■□□□ 1.16
SFXN1-209ENST00000508290 AGO3Q9H9G7 860 aaKnown RBP22.29■■□□□ 1.16
SFXN1-209ENST00000508290 PADI3Q9ULW8 664 aa22.29■■□□□ 1.16
SFXN1-209ENST00000508290 DDX11L8A8MPP1 907 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 GAS2O43903 313 aaKnown RBP22.28■■□□□ 1.16
SFXN1-209ENST00000508290 RPS6KA5O75582 802 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 STBD1O95210 358 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 CD52P31358 61 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 NCAPH2Q6IBW4 605 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 SP7Q8TDD2 431 aaPredicted RBP22.28■■□□□ 1.16
SFXN1-209ENST00000508290 SLC7A3Q8WY07 619 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 SAMD11Q96NU1 681 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 YME1L1Q96TA2 773 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 LXNQ9BS40 222 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 OSBPL7Q9BZF2 842 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 PRDM12Q9H4Q4 367 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 AKT3Q9Y243 479 aa22.28■■□□□ 1.16
SFXN1-209ENST00000508290 IGKV6-21A0A0C4DH24 114 aa22.27■■□□□ 1.16
SFXN1-209ENST00000508290 ENPP3O14638 875 aa22.27■■□□□ 1.16
SFXN1-209ENST00000508290 LYPLA2O95372 231 aa22.27■■□□□ 1.16
SFXN1-209ENST00000508290 RFC5P40937 340 aa22.27■■□□□ 1.16
SFXN1-209ENST00000508290 MTERF2Q49AM1 385 aa22.27■■□□□ 1.16
SFXN1-209ENST00000508290 ANO5Q75V66 913 aa22.27■■□□□ 1.16
SFXN1-209ENST00000508290 MAFAQ8NHW3 353 aaPredicted RBP22.27■■□□□ 1.16
SFXN1-209ENST00000508290 TGS1Q96RS0 853 aaKnown RBP22.27■■□□□ 1.16
SFXN1-209ENST00000508290 TSPYL2Q9H2G4 693 aaPredicted RBP22.27■■□□□ 1.16
SFXN1-209ENST00000508290 CYP26B1Q9NR63 512 aa22.27■■□□□ 1.16
SFXN1-209ENST00000508290 GINS2Q9Y248 185 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms