RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 H7C1D1 291 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 FNTBP49356 437 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 NEK4P51957 841 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 PPP2CBP62714 309 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 PPP2CAP67775 309 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 SURF1Q15526 300 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 ARHGEF18Q6ZSZ5 1173 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 PTPN18Q99952 460 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 TARS2Q9BW92 718 aaKnown RBP7.34□□□□□ -1.23
DHFR-204ENST00000508282 CARD11Q9BXL7 1154 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 ZDHHC5Q9C0B5 715 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 PPP4R1LQ9P1A2 415 aa7.34□□□□□ -1.23
DHFR-204ENST00000508282 TLDC2A0PJX2 215 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 ZNF891A8MT65 544 aaPredicted RBP7.33□□□□□ -1.24
DHFR-204ENST00000508282 K7ESM1 405 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 CNOT4O95628 575 aaKnown RBP7.33□□□□□ -1.24
DHFR-204ENST00000508282 PTX3P26022 381 aaPredicted RBP7.33□□□□□ -1.24
DHFR-204ENST00000508282 ETV4P43268 484 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 KCNQ1P51787 676 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 ALDH6A1Q02252 535 aaKnown RBP7.33□□□□□ -1.24
DHFR-204ENST00000508282 USP10Q14694 798 aaKnown RBP7.33□□□□□ -1.24
DHFR-204ENST00000508282 PCBP1Q15365 356 aaKnown RBP eCLIP7.33□□□□□ -1.24
DHFR-204ENST00000508282 LIMS2Q7Z4I7 341 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 NXPE1Q8N323 547 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 MFSD3Q96ES6 412 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 FOXB1Q99853 325 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 KRTAP4-7Q9BYR0 210 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 PCIF1Q9H4Z3 704 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 ACSS2Q9NR19 701 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 H2AFY2Q9P0M6 372 aaPredicted RBP7.33□□□□□ -1.24
DHFR-204ENST00000508282 FBXO10Q9UK96 956 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 CNOT11Q9UKZ1 510 aaKnown RBP7.33□□□□□ -1.24
DHFR-204ENST00000508282 SLC4A7Q9Y6M7 1214 aa7.33□□□□□ -1.24
DHFR-204ENST00000508282 F2P00734 622 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 ATP2A2P16615 1042 aaKnown RBP7.32□□□□□ -1.24
DHFR-204ENST00000508282 SLC9A1P19634 815 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 DSG1Q02413 1049 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 EFEMP1Q12805 493 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 MOGSQ13724 837 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 ZNF174Q15697 407 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 PLEKHG4Q58EX7 1191 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 OTOP2Q7RTS6 562 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 KIF18BQ86Y91 864 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 WDR48Q8TAF3 677 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 CALML6Q8TD86 181 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 C16orf92Q96LL3 132 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 ELF4Q99607 663 aaPredicted RBP7.32□□□□□ -1.24
DHFR-204ENST00000508282 MEGF9Q9H1U4 602 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 OXSMQ9NWU1 459 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 CDC42EP3Q9UKI2 254 aa7.32□□□□□ -1.24
DHFR-204ENST00000508282 HMGCRP04035 888 aa7.31□□□□□ -1.24
DHFR-204ENST00000508282 CYP17A1P05093 508 aa7.31□□□□□ -1.24
DHFR-204ENST00000508282 APEX1P27695 318 aaKnown RBP7.31□□□□□ -1.24
DHFR-204ENST00000508282 RRADP55042 308 aa7.31□□□□□ -1.24
DHFR-204ENST00000508282 EIF4HQ15056 248 aaKnown RBP7.31□□□□□ -1.24
DHFR-204ENST00000508282 SEPT7Q16181 437 aaKnown RBP7.31□□□□□ -1.24
DHFR-204ENST00000508282 TMEM200BQ69YZ2 307 aa7.31□□□□□ -1.24
DHFR-204ENST00000508282 ESRP1Q6NXG1 681 aaKnown RBP7.31□□□□□ -1.24
DHFR-204ENST00000508282 LARP4Q71RC2 724 aaKnown RBP eCLIP7.31□□□□□ -1.24
DHFR-204ENST00000508282 IFNL2Q8IZJ0 200 aa7.31□□□□□ -1.24
DHFR-204ENST00000508282 ZKSCAN5Q9Y2L8 839 aa7.31□□□□□ -1.24
DHFR-204ENST00000508282 SPO11Q9Y5K1 396 aa7.31□□□□□ -1.24
DHFR-204ENST00000508282 A0A0G2JNJ9 132 aa7.3□□□□□ -1.24
DHFR-204ENST00000508282 PRLP01236 227 aa7.3□□□□□ -1.24
DHFR-204ENST00000508282 SLC6A3Q01959 620 aa7.3□□□□□ -1.24
DHFR-204ENST00000508282 ZNF827Q17R98 1081 aa7.3□□□□□ -1.24
DHFR-204ENST00000508282 SLFN13Q68D06 897 aa7.3□□□□□ -1.24
DHFR-204ENST00000508282 TRIM68Q6AZZ1 485 aa7.3□□□□□ -1.24
DHFR-204ENST00000508282 GRAMD4Q6IC98 578 aa7.3□□□□□ -1.24
DHFR-204ENST00000508282 PPM1KQ8N3J5 372 aa7.3□□□□□ -1.24
DHFR-204ENST00000508282 JADE2Q9NQC1 790 aa7.3□□□□□ -1.24
DHFR-204ENST00000508282 Q9UFV3 132 aa7.3□□□□□ -1.24
DHFR-204ENST00000508282 A0A087X0B3 334 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 NPEPPSL1A6NEC2 478 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 GPR42O15529 346 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 GAS7O60861 476 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 MAFO75444 373 aaPredicted RBP7.29□□□□□ -1.24
DHFR-204ENST00000508282 RGS3P49796 1198 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 GYS2P54840 703 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 EPHA7Q15375 998 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 GLB1LQ6UWU2 654 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 PRRT2Q7Z6L0 340 aaPredicted RBP7.29□□□□□ -1.24
DHFR-204ENST00000508282 CHTF18Q8WVB6 975 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 E2F7Q96AV8 911 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 MAML3Q96JK9 1138 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 SCYL1Q96KG9 808 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 KIAA1683Q9H0B3 1180 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 IFT57Q9NWB7 429 aa7.29□□□□□ -1.24
DHFR-204ENST00000508282 UBA6A0AVT1 1052 aaPredicted RBP7.28□□□□□ -1.24
DHFR-204ENST00000508282 GSG1L2A8MUP6 293 aa7.28□□□□□ -1.24
DHFR-204ENST00000508282 KRTAP10-2P60368 255 aa7.28□□□□□ -1.24
DHFR-204ENST00000508282 ROM1Q03395 351 aa7.28□□□□□ -1.24
DHFR-204ENST00000508282 NOLC1Q14978 699 aaKnown RBP eCLIP7.28□□□□□ -1.241e-6■■■■□ 20.6
DHFR-204ENST00000508282 TBR1Q16650 682 aa7.28□□□□□ -1.24
DHFR-204ENST00000508282 RNF151Q2KHN1 245 aa7.28□□□□□ -1.24
DHFR-204ENST00000508282 SLFN12LQ6IEE8 588 aa7.28□□□□□ -1.24
DHFR-204ENST00000508282 BCL6BQ8N143 479 aaPredicted RBP7.28□□□□□ -1.24
DHFR-204ENST00000508282 SAMD11Q96NU1 681 aa7.28□□□□□ -1.24
DHFR-204ENST00000508282 SEC61A2Q9H9S3 476 aa7.28□□□□□ -1.24
DHFR-204ENST00000508282 TOMM22Q9NS69 142 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms