RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 POLR2MP0CAP2 368 aa10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 SP100P23497 879 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 EVCP57679 992 aa10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 ANKRD1Q15327 319 aa10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 PPP1R18Q6NYC8 613 aa10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 TMEM184AQ6ZMB5 413 aa10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 Q6ZUG5 572 aa10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 KREMEN2Q8NCW0 462 aa10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 FEZF2Q8TBJ5 459 aa10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 NKD2Q969F2 451 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 GPR20Q99678 358 aa10.54□□□□□ -0.72
UBE2D3-223ENST00000508249 BAZ2BQ9UIF8 2168 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 ERVFC1P60507 584 aa10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 MRPS9P82933 396 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 PAN2Q504Q3 1202 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 MARCH8Q5T0T0 291 aa10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 CPLX2Q6PUV4 134 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 SRBD1Q8N5C6 995 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 BRF1Q92994 677 aa10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 CUL5Q93034 780 aa10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 ZBTB10Q96DT7 871 aa10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 MYL10Q9BUA6 226 aa10.53□□□□□ -0.72
UBE2D3-223ENST00000508249 MBLAC1A4D2B0 266 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 C2CD4DB7Z1M9 353 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 PIK3CDO00329 1044 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 STAM2O75886 525 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 PLEKHA8P1O95397 391 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 CFBP00751 764 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 TGFB3P10600 412 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 MYCLP12524 364 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 HOXA13P31271 388 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 CD52P31358 61 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 ARHGAP4P98171 946 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 ASTLQ6HA08 431 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 ANKRD54Q6NXT1 300 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 XRRA1Q6P2D8 792 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 TSHZ1Q6ZSZ6 1077 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 FAM177A1Q8N128 213 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 RASGRP4Q8TDF6 673 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 CCDC12Q8WUD4 166 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 PPP2R3CQ969Q6 453 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 ZNF274Q96GC6 653 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 TCEANC2Q96MN5 208 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 CNTNAP3BQ96NU0 1288 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 INPP4AQ96PE3 977 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 CNTNAP3Q9BZ76 1288 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 TMX1Q9H3N1 280 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 POMKQ9H5K3 350 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 TLE6Q9H808 572 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 BRPF3Q9ULD4 1205 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 SORCS3Q9UPU3 1222 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 CNTNAP5Q8WYK1 1306 aa10.52□□□□□ -0.73
UBE2D3-223ENST00000508249 CHD8Q9HCK8 2581 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 ASPMQ8IZT6 3477 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 SPTBN2O15020 2390 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 PI15O43692 258 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 NPR3P17342 541 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 RXRAP19793 462 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 AKAP17AQ02040 695 aaKnown RBP10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 MTMR3Q13615 1198 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 MCTP2Q6DN12 878 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 KCNV1Q6PIU1 500 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 METTL7BQ6UX53 244 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 NPAS4Q8IUM7 802 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 UBALD2Q8IYN6 164 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 APOL5Q9BWW9 433 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 UPF2Q9HAU5 1272 aaKnown RBP10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 PDRG1Q9NUG6 133 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 NAP1L2Q9ULW6 460 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 CDY2AQ9Y6F7 541 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 PATJQ8NI35 1801 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 GPR179Q6PRD1 2367 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 BAHCC1Q9P281 2608 aa10.51□□□□□ -0.73
UBE2D3-223ENST00000508249 SPEGQ15772 3267 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 FRYQ5TBA9 3013 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 HIDE1A8MVS5 230 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 MGEA5O60502 916 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 CDKL5O76039 1030 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 ASGR2P07307 311 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 IFNAR1P17181 557 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 UBE3AQ05086 875 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 APOBRQ0VD83 1088 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 FUT2Q10981 343 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 COL9A3Q14050 684 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 CYFIP1Q7L576 1253 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 TRIM22Q8IYM9 498 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 SMARCC2Q8TAQ2 1214 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 DNAJB3Q8WWF6 145 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 CDCA3Q99618 268 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 RNF26Q9BY78 433 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 MLXIPQ9HAP2 919 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 NRCAMQ92823 1304 aa10.5□□□□□ -0.73
UBE2D3-223ENST00000508249 ESYT2A0FGR8 921 aa10.49□□□□□ -0.73
UBE2D3-223ENST00000508249 SPATA31C2B4DYI2 1134 aa10.49□□□□□ -0.73
UBE2D3-223ENST00000508249 CPLX1O14810 134 aa10.49□□□□□ -0.73
UBE2D3-223ENST00000508249 PRPF3O43395 683 aaKnown RBP10.49□□□□□ -0.73
UBE2D3-223ENST00000508249 FGF18O76093 207 aa10.49□□□□□ -0.73
UBE2D3-223ENST00000508249 FOSP01100 380 aaPredicted RBP10.49□□□□□ -0.73
UBE2D3-223ENST00000508249 GNAT1P11488 350 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms