RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.3■□□□□ 0.52
DDX41-207ENST00000507900 STXBP4Q6ZWJ1 553 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 CNGA4Q8IV77 575 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 MORC4Q8TE76 937 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 BRI3BPQ8WY22 251 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 EEF2KMTQ96G04 330 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 ERGIC2Q96RQ1 377 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 STRA6Q9BX79 667 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 PLXNA1Q9UIW2 1896 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 BTBD19C9JJ37 291 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 CALUO43852 315 aaPredicted RBP18.3■□□□□ 0.52
DDX41-207ENST00000507900 PPP1R37O75864 691 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 PRPF6O94906 941 aaKnown RBP18.3■□□□□ 0.52
DDX41-207ENST00000507900 STBD1O95210 358 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 TGFB3P10600 412 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 CYP2C8P10632 490 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 GCLCP48506 637 aaPredicted RBP18.3■□□□□ 0.52
DDX41-207ENST00000507900 VWA3BQ502W6 1294 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 SPRYD7Q5W111 196 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 MIS18BP1Q6P0N0 1132 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 ZNF720Q7Z2F6 126 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 FAM178BQ8IXR5 827 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 BCAS3Q9H6U6 928 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 MORF4L1Q9UBU8 362 aa18.3■□□□□ 0.52
DDX41-207ENST00000507900 SFI1A8K8P3 1242 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 BACH1O14867 736 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 ARHGAP6O43182 974 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 TPM1P09493 284 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 SUPT20HL2P0C7V6 817 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 ADKP55263 362 aaKnown RBP18.29■□□□□ 0.52
DDX41-207ENST00000507900 CCNA1P78396 465 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 GOLGA8FQ08AF8 430 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 GOLGA8DPQ0D2H9 430 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 ALCAMQ13740 583 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 ODR4Q5SWX8 454 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 ANO5Q75V66 913 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 OTUD6AQ7L8S5 288 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 RETREG2Q8NC44 543 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 GPRC5AQ8NFJ5 357 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 BAG1Q99933 345 aaPredicted RBP18.29■□□□□ 0.52
DDX41-207ENST00000507900 NAA15Q9BXJ9 866 aaKnown RBP18.29■□□□□ 0.52
DDX41-207ENST00000507900 LARSQ9P2J5 1176 aaKnown RBP18.29■□□□□ 0.52
DDX41-207ENST00000507900 GABBR1Q9UBS5 961 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 ZMYM2Q9UBW7 1377 aa18.29■□□□□ 0.52
DDX41-207ENST00000507900 SYNGAP1Q96PV0 1343 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 CETN3O15182 167 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 NKRFO15226 690 aaKnown RBP eCLIP18.28■□□□□ 0.52
DDX41-207ENST00000507900 ZNF862O60290 1169 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 UBA1P22314 1058 aaKnown RBP18.28■□□□□ 0.52
DDX41-207ENST00000507900 NMT1P30419 496 aaKnown RBP18.28■□□□□ 0.52
DDX41-207ENST00000507900 CASP14P31944 242 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 FXR1P51114 621 aaKnown RBP eCLIP18.28■□□□□ 0.52
DDX41-207ENST00000507900 TBC1D8BQ0IIM8 1120 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 FIGNQ5HY92 759 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 FKBP15Q5T1M5 1219 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 E4F1Q66K89 784 aaPredicted RBP18.28■□□□□ 0.52
DDX41-207ENST00000507900 KCNV1Q6PIU1 500 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 SEPT14Q6ZU15 432 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 CCDC60Q8IWA6 550 aaPredicted RBP18.28■□□□□ 0.52
DDX41-207ENST00000507900 SMCR8Q8TEV9 937 aaPredicted RBP18.28■□□□□ 0.52
DDX41-207ENST00000507900 IQCDQ96DY2 449 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 DRC1Q96MC2 740 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 CCDC43Q96MW1 224 aaKnown RBP18.28■□□□□ 0.52
DDX41-207ENST00000507900 NUP58Q9BVL2 599 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 NDST4Q9H3R1 872 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 ST6GALNAC4Q9H4F1 302 aa18.28■□□□□ 0.52
DDX41-207ENST00000507900 IGKV6D-21A0A0A0MT36 114 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 PLS3P13797 630 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 NR2F2P24468 414 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 ADAM9Q13443 819 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 NEDD9Q14511 834 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 XKR9Q5GH70 373 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 TRIM59Q8IWR1 403 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 CCAR2Q8N163 923 aaKnown RBP18.27■□□□□ 0.52
DDX41-207ENST00000507900 TTYH3Q9C0H2 523 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 PORCNQ9H237 461 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 POLD4Q9HCU8 107 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 NMRK2Q9NPI5 230 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 PCDHB13Q9Y5F0 798 aa18.27■□□□□ 0.52
DDX41-207ENST00000507900 MCM3APO60318 1980 aa18.27■□□□□ 0.51
DDX41-207ENST00000507900 TGFB1I1O43294 461 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 USO1O60763 962 aaKnown RBP18.26■□□□□ 0.51
DDX41-207ENST00000507900 FARP2O94887 1054 aaPredicted RBP18.26■□□□□ 0.51
DDX41-207ENST00000507900 ITGBL1O95965 494 aaPredicted RBP18.26■□□□□ 0.51
DDX41-207ENST00000507900 PGK2P07205 417 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 RPL13P26373 211 aaKnown RBP18.26■□□□□ 0.51
DDX41-207ENST00000507900 CCDC40Q4G0X9 1142 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 UTP14CQ5TAP6 766 aaKnown RBP18.26■□□□□ 0.51
DDX41-207ENST00000507900 CST9Q5W186 159 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 SWSAP1Q6NVH7 229 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 CYFIP1Q7L576 1253 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 ABRAQ8N0Z2 381 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 CAPN11Q9UMQ6 739 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 TELO2Q9Y4R8 837 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 MAFBQ9Y5Q3 323 aaPredicted RBP18.26■□□□□ 0.51
DDX41-207ENST00000507900 ZNF236Q9UL36 1845 aa18.26■□□□□ 0.51
DDX41-207ENST00000507900 TMEM150BA6NC51 233 aa18.25■□□□□ 0.51
DDX41-207ENST00000507900 PES1O00541 588 aaKnown RBP18.25■□□□□ 0.51
DDX41-207ENST00000507900 SLC16A3O15427 465 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms