RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ZHX2Q9Y6X8 837 aa19.42■□□□□ 0.7
SFXN1-208ENST00000507823 GTPBP10A4D1E9 387 aaKnown RBP19.41■□□□□ 0.7
SFXN1-208ENST00000507823 ARHGEF35A5YM69 484 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 AFPP02771 609 aaKnown RBP19.41■□□□□ 0.7
SFXN1-208ENST00000507823 PLEKP08567 350 aaPredicted RBP19.41■□□□□ 0.7
SFXN1-208ENST00000507823 LMNB1P20700 586 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 NMT1P30419 496 aaKnown RBP19.41■□□□□ 0.7
SFXN1-208ENST00000507823 KCNA1Q09470 495 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 RDM1Q8NG50 284 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 FBXL5Q9UKA1 691 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 SFI1A8K8P3 1242 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 EIF2AK2P19525 551 aaKnown RBP19.41■□□□□ 0.7
SFXN1-208ENST00000507823 EIF4A3P38919 411 aaKnown RBP19.41■□□□□ 0.7
SFXN1-208ENST00000507823 QARSP47897 775 aaKnown RBP19.41■□□□□ 0.7
SFXN1-208ENST00000507823 KIF11P52732 1056 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 MYBPC2Q14324 1141 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 COG2Q14746 738 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 SRGAP1Q7Z6B7 1085 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 KIAA1328Q86T90 577 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 VSIG10LQ86VR7 867 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 C4orf19Q8IY42 314 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 CEP112Q8N8E3 955 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.41■□□□□ 0.7
SFXN1-208ENST00000507823 SENP7Q9BQF6 1050 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 AIPL1Q9NZN9 384 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 GUCA1BQ9UMX6 200 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 AFG3L2Q9Y4W6 797 aa19.41■□□□□ 0.7
SFXN1-208ENST00000507823 PJA2O43164 708 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 TLR2O60603 784 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 EPB41P11171 864 aaKnown RBP19.4■□□□□ 0.7
SFXN1-208ENST00000507823 ERCC3P19447 782 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 TUBB4BP68371 445 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 WHAMMP3Q1A5X7 153 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 CACNA2D4Q7Z3S7 1137 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 SLC9A9Q8IVB4 645 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 GPRASP2Q96D09 838 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 TIPINQ9BVW5 301 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 MAFGO15525 162 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 RARRES1P49788 294 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 JAK3P52333 1124 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 HMGCS2P54868 508 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 SPA17Q15506 151 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 SUPT20HL1Q3ZLR7 823 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 PAPD7Q5XG87 772 aaKnown RBP19.4■□□□□ 0.7
SFXN1-208ENST00000507823 PADI6Q6TGC4 694 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 FAM178BQ8IXR5 827 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 RABGGTAQ92696 567 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 SLC35C1Q96A29 364 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 MYO6Q9UM54 1294 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 PCDHB13Q9Y5F0 798 aa19.4■□□□□ 0.7
SFXN1-208ENST00000507823 HIP1RO75146 1068 aa19.39■□□□□ 0.7
SFXN1-208ENST00000507823 SERPING1P05155 500 aa19.39■□□□□ 0.7
SFXN1-208ENST00000507823 XRCC5P13010 732 aaKnown RBP19.39■□□□□ 0.7
SFXN1-208ENST00000507823 SFNP31947 248 aa19.39■□□□□ 0.7
SFXN1-208ENST00000507823 ALCAMQ13740 583 aa19.39■□□□□ 0.7
SFXN1-208ENST00000507823 PRAMEF18Q5VWM3 479 aa19.39■□□□□ 0.7
SFXN1-208ENST00000507823 TRAPPC11Q7Z392 1133 aa19.39■□□□□ 0.7
SFXN1-208ENST00000507823 GPR161Q8N6U8 529 aaKnown RBP19.39■□□□□ 0.7
SFXN1-208ENST00000507823 GOLGA5Q8TBA6 731 aa19.39■□□□□ 0.7
SFXN1-208ENST00000507823 PCDHA13Q9Y5I0 950 aa19.39■□□□□ 0.7
SFXN1-208ENST00000507823 DDX39AO00148 427 aaKnown RBP19.39■□□□□ 0.69
SFXN1-208ENST00000507823 CASP4P49662 377 aa19.39■□□□□ 0.69
SFXN1-208ENST00000507823 KRT76Q01546 638 aa19.39■□□□□ 0.69
SFXN1-208ENST00000507823 BAATQ14032 418 aaPredicted RBP19.39■□□□□ 0.69
SFXN1-208ENST00000507823 INPP4AQ96PE3 977 aaPredicted RBP19.39■□□□□ 0.69
SFXN1-208ENST00000507823 ST6GALNAC4Q9H4F1 302 aa19.39■□□□□ 0.69
SFXN1-208ENST00000507823 POLD4Q9HCU8 107 aa19.39■□□□□ 0.69
SFXN1-208ENST00000507823 PTPRFP10586 1907 aa19.39■□□□□ 0.69
SFXN1-208ENST00000507823 WDR81Q562E7 1941 aa19.39■□□□□ 0.69
SFXN1-208ENST00000507823 CCND2P30279 289 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 EPS15P42566 896 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 TMEM132BQ14DG7 1078 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 ZC2HC1CQ53FD0 456 aaPredicted RBP19.38■□□□□ 0.69
SFXN1-208ENST00000507823 ODR4Q5SWX8 454 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 SFMBT2Q5VUG0 894 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 ARHGEF16Q5VV41 709 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 GOLGA1Q92805 767 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 POLR2AP24928 1970 aaKnown RBP19.38■□□□□ 0.69
SFXN1-208ENST00000507823 ANO9A1A5B4 782 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 POLR2FP61218 127 aaKnown RBP19.38■□□□□ 0.69
SFXN1-208ENST00000507823 CYP27A1Q02318 531 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 KIF5AQ12840 1032 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 A0A0G2JMZ2 1700 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 LCTP09848 1927 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 WDR64B1ANS9 1081 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 ATP9AO75110 1047 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 CCNE2O96020 404 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 PSMC2P35998 433 aaKnown RBP19.38■□□□□ 0.69
SFXN1-208ENST00000507823 SLC9C1Q4G0N8 1177 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 SNRNP48Q6IEG0 339 aaKnown RBP19.38■□□□□ 0.69
SFXN1-208ENST00000507823 ZNF746Q6NUN9 644 aaPredicted RBP19.38■□□□□ 0.69
SFXN1-208ENST00000507823 NSMFQ6X4W1 530 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 TEX13BQ9BXU2 312 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 GBP3Q9H0R5 595 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 AGPAT3Q9NRZ7 376 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 ANKEF1Q9NU02 776 aa19.38■□□□□ 0.69
SFXN1-208ENST00000507823 USP2O75604 605 aaPredicted RBP19.37■□□□□ 0.69
SFXN1-208ENST00000507823 NR3C2P08235 984 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 PON1P27169 355 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 PSMC5P62195 406 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms