RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 NME9Q86XW9 330 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 ZZZ3Q8IYH5 903 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 HIPK4Q8NE63 616 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 USP7Q93009 1102 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 MBD6Q96DN6 1003 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 GPR101Q96P66 508 aaPredicted RBP4.12□□□□□ -1.75
GYPB-207ENST00000506679 KCNC2Q96PR1 638 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 TTC1Q99614 292 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 TACO1Q9BSH4 297 aaKnown RBP4.12□□□□□ -1.75
GYPB-207ENST00000506679 OR10A5Q9H207 317 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 UCKL1Q9NWZ5 548 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 CROTQ9UKG9 612 aa4.12□□□□□ -1.75
GYPB-207ENST00000506679 SHROOM4Q9ULL8 1493 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 UBA6A0AVT1 1052 aaPredicted RBP4.11□□□□□ -1.75
GYPB-207ENST00000506679 DDX3XO00571 662 aaKnown RBP eCLIP4.11□□□□□ -1.75
GYPB-207ENST00000506679 FBXO21O94952 628 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 GLRBP48167 497 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 AMPD3Q01432 767 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 ADCY1Q08828 1119 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 DPP8Q6V1X1 898 aaPredicted RBP4.11□□□□□ -1.75
GYPB-207ENST00000506679 SPOCD1Q6ZMY3 1216 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 KANSL1Q7Z3B3 1105 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 SP8Q8IXZ3 490 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 ZNF610Q8N9Z0 462 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 MARCH10Q8NA82 808 aaPredicted RBP4.11□□□□□ -1.75
GYPB-207ENST00000506679 E2F7Q96AV8 911 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 MAML3Q96JK9 1138 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 SPATA25Q9BR10 227 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 KATNBL1Q9H079 304 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 TOMM22Q9NS69 142 aa4.11□□□□□ -1.75
GYPB-207ENST00000506679 USP36Q9P275 1121 aaKnown RBP4.11□□□□□ -1.75
GYPB-207ENST00000506679 ARID1BQ8NFD5 2236 aaPredicted RBP4.1□□□□□ -1.75
GYPB-207ENST00000506679 H0Y858 1186 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 GPR39O43194 453 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 NOBOXO60393 691 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 CD40P25942 277 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 NFKB2Q00653 900 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 TOP3AQ13472 1001 aaPredicted RBP4.1□□□□□ -1.75
GYPB-207ENST00000506679 MOGSQ13724 837 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 STAT4Q14765 748 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 MYBPC3Q14896 1274 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 ATP13A4Q4VNC1 1196 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 CT47A1Q5JQC4 288 aaPredicted RBP4.1□□□□□ -1.75
GYPB-207ENST00000506679 TTC38Q5R3I4 469 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 TMEM200BQ69YZ2 307 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 TRMT10BQ6PF06 316 aaKnown RBP4.1□□□□□ -1.75
GYPB-207ENST00000506679 LHFPL2Q6ZUX7 228 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 C11orf74Q86VG3 221 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 PHYKPLQ8IUZ5 450 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 PASD1Q8IV76 773 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 BCL6BQ8N143 479 aaPredicted RBP4.1□□□□□ -1.75
GYPB-207ENST00000506679 TXNDC5Q8NBS9 432 aaKnown RBP4.1□□□□□ -1.75
GYPB-207ENST00000506679 NUDT10Q8NFP7 164 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 CALML6Q8TD86 181 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 RTF1Q92541 710 aaKnown RBP4.1□□□□□ -1.75
GYPB-207ENST00000506679 ERCC4Q92889 916 aaPredicted RBP4.1□□□□□ -1.75
GYPB-207ENST00000506679 SLC5A5Q92911 643 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 NUDT11Q96G61 164 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 AJUBAQ96IF1 538 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 BRINP2Q9C0B6 783 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 HAPLN2Q9GZV7 340 aa4.1□□□□□ -1.75
GYPB-207ENST00000506679 K7ESF4 209 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 ELL2O00472 640 aaPredicted RBP4.09□□□□□ -1.75
GYPB-207ENST00000506679 CUTAO60888 179 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 ULK1O75385 1050 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 CPEP16870 476 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 APEX1P27695 318 aaKnown RBP4.09□□□□□ -1.75
GYPB-207ENST00000506679 POLD1P28340 1107 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 CNGA1P29973 690 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 LSP1P33241 339 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 ETV4P43268 484 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 KCNC1P48547 511 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 RGS3P49796 1198 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 CD83Q01151 205 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 SLC6A3Q01959 620 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 ROM1Q03395 351 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 EIF4HQ15056 248 aaKnown RBP4.09□□□□□ -1.75
GYPB-207ENST00000506679 DDB1Q16531 1140 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 ZNF827Q17R98 1081 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 BROXQ5VW32 411 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 SLFN12LQ6IEE8 588 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 Q6ZUG5 572 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 DDX42Q86XP3 938 aaKnown RBP eCLIP4.09□□□□□ -1.75
GYPB-207ENST00000506679 REXO1L1PQ8IX06 675 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 C7orf31Q8N865 590 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 CLRN3Q8NCR9 226 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 GPATCH3Q96I76 525 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 ZNF496Q96IT1 587 aaPredicted RBP4.09□□□□□ -1.75
GYPB-207ENST00000506679 ZDHHC5Q9C0B5 715 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 PITHD1Q9GZP4 211 aaPredicted RBP4.09□□□□□ -1.75
GYPB-207ENST00000506679 XYLT2Q9H1B5 865 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 SEMA4AQ9H3S1 761 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 MS4A5Q9H3V2 200 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 L2HGDHQ9H9P8 463 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 FBXO10Q9UK96 956 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 ADAM29Q9UKF5 820 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 ATP8A1Q9Y2Q0 1164 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 COL4A3BPQ9Y5P4 624 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 PHLDB1Q86UU1 1377 aa4.09□□□□□ -1.75
GYPB-207ENST00000506679 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms