RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 BRAPQ7Z569 592 aa18.71■□□□□ 0.59
SNCA-209ENST00000506244 ZNF710Q8N1W2 664 aa18.71■□□□□ 0.59
SNCA-209ENST00000506244 USP38Q8NB14 1042 aa18.71■□□□□ 0.59
SNCA-209ENST00000506244 SLC9A7Q96T83 725 aa18.71■□□□□ 0.59
SNCA-209ENST00000506244 JPH2Q9BR39 696 aaPredicted RBP18.71■□□□□ 0.59
SNCA-209ENST00000506244 RAB34Q9BZG1 259 aa18.71■□□□□ 0.59
SNCA-209ENST00000506244 TMEM60Q9H2L4 133 aa18.71■□□□□ 0.59
SNCA-209ENST00000506244 ZSWIM4Q9H7M6 989 aa18.71■□□□□ 0.59
SNCA-209ENST00000506244 TRPV2Q9Y5S1 764 aa18.71■□□□□ 0.59
SNCA-209ENST00000506244 CDY2AQ9Y6F7 541 aa18.71■□□□□ 0.59
SNCA-209ENST00000506244 VPS37CA5D8V6 355 aaPredicted RBP18.7■□□□□ 0.58
SNCA-209ENST00000506244 HSP90AA1P07900 732 aaKnown RBP18.7■□□□□ 0.58
SNCA-209ENST00000506244 MGAT3Q09327 533 aa18.7■□□□□ 0.58
SNCA-209ENST00000506244 IKBKEQ14164 716 aa18.7■□□□□ 0.58
SNCA-209ENST00000506244 PLEKHG4Q58EX7 1191 aa18.7■□□□□ 0.58
SNCA-209ENST00000506244 C4orf19Q8IY42 314 aa18.7■□□□□ 0.58
SNCA-209ENST00000506244 EXOC8Q8IYI6 725 aa18.7■□□□□ 0.58
SNCA-209ENST00000506244 METTL13Q8N6R0 699 aa18.7■□□□□ 0.58
SNCA-209ENST00000506244 ERMNQ8TAM6 284 aa18.7■□□□□ 0.58
SNCA-209ENST00000506244 LRCH3Q96II8 777 aa18.7■□□□□ 0.58
SNCA-209ENST00000506244 NIFKQ9BYG3 293 aaKnown RBP18.7■□□□□ 0.58
SNCA-209ENST00000506244 CXXC1Q9P0U4 656 aaPredicted RBP18.7■□□□□ 0.58
SNCA-209ENST00000506244 SQORQ9Y6N5 450 aa18.7■□□□□ 0.58
SNCA-209ENST00000506244 KDM3AQ9Y4C1 1321 aa18.7■□□□□ 0.58
SNCA-209ENST00000506244 TMEM265A0A087WTH1 108 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 DDX11L8A8MPP1 907 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 CHRNA1P02708 482 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 ATP2A2P16615 1042 aaKnown RBP18.69■□□□□ 0.58
SNCA-209ENST00000506244 GPNMBQ14956 572 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 RAB30Q15771 203 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 MTERF2Q49AM1 385 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 HAUS3Q68CZ6 603 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 FAM43BQ6ZT52 329 aaPredicted RBP18.69■□□□□ 0.58
SNCA-209ENST00000506244 OTUD6AQ7L8S5 288 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 PHOSPHO2Q8TCD6 241 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 ZBTB10Q96DT7 871 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 DYDC2Q96IM9 177 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 CCDC43Q96MW1 224 aaKnown RBP18.69■□□□□ 0.58
SNCA-209ENST00000506244 EIF2AK1Q9BQI3 630 aaKnown RBP18.69■□□□□ 0.58
SNCA-209ENST00000506244 IFIH1Q9BYX4 1025 aaKnown RBP18.69■□□□□ 0.58
SNCA-209ENST00000506244 STK24Q9Y6E0 443 aa18.69■□□□□ 0.58
SNCA-209ENST00000506244 TET1Q8NFU7 2136 aa18.68■□□□□ 0.58
SNCA-209ENST00000506244 SIP14410 1827 aa18.68■□□□□ 0.58
SNCA-209ENST00000506244 POTEMA6NI47 508 aa18.68■□□□□ 0.58
SNCA-209ENST00000506244 YWHABP31946 246 aaKnown RBP18.68■□□□□ 0.58
SNCA-209ENST00000506244 TOB1P50616 345 aaPredicted RBP18.68■□□□□ 0.58
SNCA-209ENST00000506244 CYP4A11Q02928 519 aa18.68■□□□□ 0.58
SNCA-209ENST00000506244 TARBP2Q15633 366 aaKnown RBP18.68■□□□□ 0.58
SNCA-209ENST00000506244 FBXO47Q5MNV8 452 aa18.68■□□□□ 0.58
SNCA-209ENST00000506244 TSHZ1Q6ZSZ6 1077 aa18.68■□□□□ 0.58
SNCA-209ENST00000506244 DBF4BQ8NFT6 615 aa18.68■□□□□ 0.58
SNCA-209ENST00000506244 CELF4Q9BZC1 486 aaKnown RBP18.68■□□□□ 0.58
SNCA-209ENST00000506244 AKT3Q9Y243 479 aa18.68■□□□□ 0.58
SNCA-209ENST00000506244 PCDHB6Q9Y5E3 794 aa18.68■□□□□ 0.58
SNCA-209ENST00000506244 LYPLA2O95372 231 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 BMP15O95972 392 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 GHRP10912 638 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 PRPHP41219 470 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 DNM2P50570 870 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 FXR2P51116 673 aaKnown RBP eCLIP18.67■□□□□ 0.58
SNCA-209ENST00000506244 CLCN3P51790 818 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 WDR5P61964 334 aaKnown RBP18.67■□□□□ 0.58
SNCA-209ENST00000506244 PTGDRQ13258 359 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 NBR1Q14596 966 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 ODR4Q5SWX8 454 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 EFCAB12Q6NXP0 572 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 ANO5Q75V66 913 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 TPH2Q8IWU9 490 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 KIAA0319LQ8IZA0 1049 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 SLC7A3Q8WY07 619 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 TUFT1Q9NNX1 390 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 CYP26B1Q9NR63 512 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.67■□□□□ 0.58
SNCA-209ENST00000506244 RGL1Q9NZL6 768 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 MSRAQ9UJ68 235 aa18.67■□□□□ 0.58
SNCA-209ENST00000506244 GAS2O43903 313 aaKnown RBP18.66■□□□□ 0.58
SNCA-209ENST00000506244 STBD1O95210 358 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 PDIA4P13667 645 aaKnown RBP18.66■□□□□ 0.58
SNCA-209ENST00000506244 DNAJB2P25686 324 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 RFC5P40937 340 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 TECP42680 631 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 POLGP54098 1239 aaPredicted RBP18.66■□□□□ 0.58
SNCA-209ENST00000506244 CDC42EP1Q00587 391 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 TMEM62Q0P6H9 643 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 CTTNQ14247 550 aaKnown RBP18.66■□□□□ 0.58
SNCA-209ENST00000506244 LPIN1Q14693 890 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 ZNF697Q5TEC3 545 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 FAM109BQ6ICB4 259 aaPredicted RBP18.66■□□□□ 0.58
SNCA-209ENST00000506244 LINC01465Q8N7H1 131 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 CEP170P1Q96L14 293 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 HSD17B14Q9BPX1 270 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 MICAL3Q7RTP6 2002 aa18.66■□□□□ 0.58
SNCA-209ENST00000506244 MAFO75444 373 aaPredicted RBP18.65■□□□□ 0.58
SNCA-209ENST00000506244 SLITRK3O94933 977 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 AMHP03971 560 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 SYT1P21579 422 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 MUTP22033 750 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 PAK2Q13177 524 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 PLA2G4FQ68DD2 849 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 LRRC71Q8N4P6 559 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms