RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	KDM3A	Q9Y4C1	1321 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	MAGEB2	O15479	319 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	DHX15	O43143	795 aa	Known RBP	11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	GAS7	O60861	476 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	TMOD1	P28289	359 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	CD52	P31358	61 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	SFN	P31947	248 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	JAK3	P52333	1124 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	C8orf34	Q49A92	452 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	BLID	Q8IZY5	108 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	ZNF710	Q8N1W2	664 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	DAGLB	Q8NCG7	672 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	TBCK	Q8TEA7	893 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	TRAPPC12	Q8WVT3	735 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	WASF1	Q92558	559 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	RIT2	Q99578	217 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	NRBP2	Q9NSY0	501 aa		11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.78	□□□□□ -0.52
NR1I3-222	ENST00000506018	IGSF9B	Q9UPX0	1349 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	NCOR1	O75376	2440 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	TNFRSF10A	O00220	468 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	ENPP3	O14638	875 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	LPXN	O60711	386 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	TMEM62	Q0P6H9	643 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	NONO	Q15233	471 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	EPC2	Q52LR7	807 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	TIGD5	Q53EQ6	642 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	LRCH2	Q5VUJ6	765 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	KRT25	Q7Z3Z0	450 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	TMEM192	Q8IY95	271 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	METTL13	Q8N6R0	699 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	RDM1	Q8NG50	284 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	ADAMTS19	Q8TE59	1207 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	MAP7D2	Q96T17	732 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	NAP1L4	Q99733	375 aa	Known RBP	11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	C17orf80	Q9BSJ5	609 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	DISC1	Q9NRI5	854 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	GABBR1	Q9UBS5	961 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	LRFN2	Q9ULH4	789 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	GINS2	Q9Y248	185 aa		11.77	□□□□□ -0.53
NR1I3-222	ENST00000506018	ADGRA3	Q8IWK6	1321 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	STK36	Q9NRP7	1315 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	CCDC194	A0A1B0GVG4	234 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018		H3BNC9	293 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	GPR182	O15218	404 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	MSH4	O15457	936 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	RPS6KA5	O75582	802 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	RB1	P06400	928 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	CTNNB1	P35222	781 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	NFX1	Q12986	1120 aa	Known RBP	11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	GPM6B	Q13491	265 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	BTG3	Q14201	252 aa	Predicted RBP	11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018		Q4G0T1	1027 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	KRT40	Q6A162	431 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	MOXD1	Q6UVY6	613 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	SPRED2	Q7Z698	418 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	NPAS4	Q8IUM7	802 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	MRPL38	Q96DV4	380 aa	Known RBP	11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	UIMC1	Q96RL1	719 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	UHRF1	Q96T88	793 aa	Predicted RBP	11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	LARP6	Q9BRS8	491 aa	Known RBP	11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	OSBPL7	Q9BZF2	842 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	BRMS1	Q9HCU9	246 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	PADI3	Q9ULW8	664 aa		11.76	□□□□□ -0.53
NR1I3-222	ENST00000506018	TTC28	Q96AY4	2481 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	VCAN	P13611	3396 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	DENND3	A2RUS2	1198 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	CHMP2A	O43633	222 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	SCRN1	Q12765	414 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	MIER3	Q7Z3K6	550 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	SLC5A5	Q92911	643 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	LENG9	Q96B70	501 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	ZBTB10	Q96DT7	871 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	FAM212A	Q96EL1	285 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	LMAN2L	Q9H0V9	348 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	AGO3	Q9H9G7	860 aa	Known RBP	11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	C1orf112	Q9NSG2	853 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	AKT3	Q9Y243	479 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	BRWD1	Q9NSI6	2320 aa		11.75	□□□□□ -0.53
NR1I3-222	ENST00000506018	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	ADAMTS3	O15072	1205 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	MARCH6	O60337	910 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	PFKFB2	O60825	505 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	DKC1	O60832	514 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	C22orf31	O95567	290 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	OAT	P04181	439 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	GCFC2	P16383	781 aa	Known RBP	11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	CYP3A7	P24462	503 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	CRYBB1	P53674	252 aa	Predicted RBP	11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	CDC42EP1	Q00587	391 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	PRKCE	Q02156	737 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	GSE1	Q14687	1217 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	CMTR2	Q8IYT2	770 aa	Known RBP	11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	KIAA0319L	Q8IZA0	1049 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	SCLT1	Q96NL6	688 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	PLVAP	Q9BX97	442 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	DDX25	Q9UHL0	483 aa	Known RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms