RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 ANO3Q9BYT9 981 aa17.77■□□□□ 0.44
PDCD6-203ENST00000505526 BCAS3Q9H6U6 928 aa17.77■□□□□ 0.44
PDCD6-203ENST00000505526 NOP56O00567 594 aaKnown RBP17.76■□□□□ 0.43
PDCD6-203ENST00000505526 NCK2O43639 380 aa17.76■□□□□ 0.43
PDCD6-203ENST00000505526 LTBRP36941 435 aa17.76■□□□□ 0.43
PDCD6-203ENST00000505526 NONOQ15233 471 aaKnown RBP eCLIP17.76■□□□□ 0.437e-7■■■□□ 18.8
PDCD6-203ENST00000505526 FOXD4L6Q3SYB3 417 aaPredicted RBP17.76■□□□□ 0.43
PDCD6-203ENST00000505526 FAM173BQ6P4H8 233 aa17.76■□□□□ 0.43
PDCD6-203ENST00000505526 FOXD4L3Q6VB84 417 aaPredicted RBP17.76■□□□□ 0.43
PDCD6-203ENST00000505526 RPAINQ86UA6 219 aa17.76■□□□□ 0.43
PDCD6-203ENST00000505526 FIBCD1Q8N539 461 aa17.76■□□□□ 0.43
PDCD6-203ENST00000505526 APBB2Q92870 758 aa17.76■□□□□ 0.43
PDCD6-203ENST00000505526 SETD4Q9NVD3 440 aa17.76■□□□□ 0.43
PDCD6-203ENST00000505526 NLRC5Q86WI3 1866 aa17.76■□□□□ 0.43
PDCD6-203ENST00000505526 GNAT1P11488 350 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 CTNNB1P35222 781 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 IRS1P35568 1242 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 INF2Q27J81 1249 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 TBCKQ8TEA7 893 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 RALGAPA2Q2PPJ7 1873 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 C5orf67F2Z3F1 127 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 RB1P06400 928 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 CTC1Q2NKJ3 1217 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 HFE2Q6ZVN8 426 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 EHMT1Q9H9B1 1298 aa17.75■□□□□ 0.43
PDCD6-203ENST00000505526 GRM6O15303 877 aa17.74■□□□□ 0.43
PDCD6-203ENST00000505526 BMPR1AP36894 532 aa17.74■□□□□ 0.43
PDCD6-203ENST00000505526 SMAD2Q15796 467 aaKnown RBP17.74■□□□□ 0.43
PDCD6-203ENST00000505526 CLUL1Q15846 466 aa17.74■□□□□ 0.43
PDCD6-203ENST00000505526 GNPTABQ3T906 1256 aa17.74■□□□□ 0.43
PDCD6-203ENST00000505526 FAM26DQ5JW98 314 aa17.74■□□□□ 0.43
PDCD6-203ENST00000505526 GPR20Q99678 358 aa17.74■□□□□ 0.43
PDCD6-203ENST00000505526 C11orf84Q9BUA3 381 aaPredicted RBP17.74■□□□□ 0.43
PDCD6-203ENST00000505526 LMAN2LQ9H0V9 348 aa17.74■□□□□ 0.43
PDCD6-203ENST00000505526 NOL7Q9UMY1 257 aaKnown RBP17.74■□□□□ 0.43
PDCD6-203ENST00000505526 ATP6V1DQ9Y5K8 247 aa17.74■□□□□ 0.43
PDCD6-203ENST00000505526 LINC00271P0C7V0 271 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 ATP2B1P20020 1258 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 SREBF1P36956 1147 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 ARHGAP4P98171 946 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 DLX2Q07687 328 aaPredicted RBP17.73■□□□□ 0.43
PDCD6-203ENST00000505526 HYAL1Q12794 435 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 NEDD9Q14511 834 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 METTL7BQ6UX53 244 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 CYFIP1Q7L576 1253 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 TRIM50Q86XT4 487 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 MFSD14AQ96MC6 490 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 POP1Q99575 1024 aaKnown RBP17.73■□□□□ 0.43
PDCD6-203ENST00000505526 RWDD3Q9Y3V2 267 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 FRMPD4Q14CM0 1322 aa17.73■□□□□ 0.43
PDCD6-203ENST00000505526 SPATA31C2B4DYI2 1134 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 MBTPS2O43462 519 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 ICAM3P32942 547 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 TOB1P50616 345 aaPredicted RBP17.72■□□□□ 0.43
PDCD6-203ENST00000505526 ADAM17P78536 824 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 MRPS9P82933 396 aaKnown RBP17.72■□□□□ 0.43
PDCD6-203ENST00000505526 LETM2Q2VYF4 491 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 RILPL1Q5EBL4 403 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 NEK8Q86SG6 692 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 LMBR1Q8WVP7 490 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 TNPO1Q92973 898 aaKnown RBP17.72■□□□□ 0.43
PDCD6-203ENST00000505526 CHAMP1Q96JM3 812 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 INPP4AQ96PE3 977 aaPredicted RBP17.72■□□□□ 0.43
PDCD6-203ENST00000505526 MUTYHQ9UIF7 546 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 ZNF215Q9UL58 517 aaPredicted RBP17.72■□□□□ 0.43
PDCD6-203ENST00000505526 ADGRA3Q8IWK6 1321 aa17.72■□□□□ 0.43
PDCD6-203ENST00000505526 MYH15Q9Y2K3 1946 aa17.71■□□□□ 0.43
PDCD6-203ENST00000505526 WNT7AO00755 349 aa17.71■□□□□ 0.43
PDCD6-203ENST00000505526 STAM2O75886 525 aa17.71■□□□□ 0.43
PDCD6-203ENST00000505526 CHRNA1P02708 482 aa17.71■□□□□ 0.43
PDCD6-203ENST00000505526 TRAPPC10P48553 1259 aa17.71■□□□□ 0.43
PDCD6-203ENST00000505526 NBR1Q14596 966 aa17.71■□□□□ 0.43
PDCD6-203ENST00000505526 HERC4Q5GLZ8 1057 aaPredicted RBP17.71■□□□□ 0.43
PDCD6-203ENST00000505526 UTP14CQ5TAP6 766 aaKnown RBP17.71■□□□□ 0.43
PDCD6-203ENST00000505526 CRYGNQ8WXF5 182 aa17.71■□□□□ 0.43
PDCD6-203ENST00000505526 IGFLR1Q9H665 355 aa17.71■□□□□ 0.43
PDCD6-203ENST00000505526 RTEL1Q9NZ71 1219 aa17.71■□□□□ 0.43
PDCD6-203ENST00000505526 EDIL3O43854 480 aa17.7■□□□□ 0.42
PDCD6-203ENST00000505526 GHRP10912 638 aa17.7■□□□□ 0.42
PDCD6-203ENST00000505526 GTF2F1P35269 517 aaKnown RBP eCLIP17.7■□□□□ 0.424e-8■■■■□ 22.3
PDCD6-203ENST00000505526 DNM1Q05193 864 aaKnown RBP17.7■□□□□ 0.42
PDCD6-203ENST00000505526 SEMA3FQ13275 785 aa17.7■□□□□ 0.42
PDCD6-203ENST00000505526 SMAD4Q13485 552 aaKnown RBP17.7■□□□□ 0.42
PDCD6-203ENST00000505526 TTC38Q5R3I4 469 aa17.7■□□□□ 0.42
PDCD6-203ENST00000505526 RNF135Q8IUD6 432 aa17.7■□□□□ 0.42
PDCD6-203ENST00000505526 CLP1Q92989 425 aaKnown RBP17.7■□□□□ 0.42
PDCD6-203ENST00000505526 RC3H2Q9HBD1 1191 aaKnown RBP17.7■□□□□ 0.42
PDCD6-203ENST00000505526 TELO2Q9Y4R8 837 aa17.7■□□□□ 0.42
PDCD6-203ENST00000505526 ATG2AQ2TAZ0 1938 aa17.7■□□□□ 0.42
PDCD6-203ENST00000505526 MYO7AQ13402 2215 aa17.7■□□□□ 0.42
PDCD6-203ENST00000505526 FIBPO43427 364 aa17.69■□□□□ 0.42
PDCD6-203ENST00000505526 CCNT1O60563 726 aaKnown RBP17.69■□□□□ 0.42
PDCD6-203ENST00000505526 TBX10O75333 385 aa17.69■□□□□ 0.42
PDCD6-203ENST00000505526 CSPG5O95196 566 aa17.69■□□□□ 0.42
PDCD6-203ENST00000505526 USP11P51784 963 aa17.69■□□□□ 0.42
PDCD6-203ENST00000505526 PCNX4Q63HM2 1172 aa17.69■□□□□ 0.42
PDCD6-203ENST00000505526 ZNF396Q96N95 335 aaPredicted RBP17.69■□□□□ 0.42
PDCD6-203ENST00000505526 USP28Q96RU2 1077 aa17.69■□□□□ 0.42
PDCD6-203ENST00000505526 TFIP11Q9UBB9 837 aaKnown RBP17.69■□□□□ 0.42
PDCD6-203ENST00000505526 PCDHB6Q9Y5E3 794 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms