RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 POLD1P28340 1107 aa7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 IL13RA1P78552 427 aa7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 USP10Q14694 798 aaKnown RBP7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 TBR1Q16650 682 aa7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 RNF151Q2KHN1 245 aa7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 FIGNQ5HY92 759 aa7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 NBPF6Q5VWK0 638 aa7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 NLGN4XQ8N0W4 816 aa7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 NEIL1Q96FI4 390 aaPredicted RBP7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 NBPF4Q96M43 638 aa7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 LMF1Q96S06 567 aa7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 CDK11AQ9UQ88 783 aaPredicted RBP7.13□□□□□ -1.27
DEPDC1B-203ENST00000505017 PTPRGP23470 1445 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 CCNB3Q8WWL7 1395 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 KDM2BQ8NHM5 1336 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 CCDC66A2RUB6 948 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 U2SURPO15042 1029 aaKnown RBP7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 FSHBP01225 129 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 AOAHP28039 575 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 SELENOPP49908 381 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 GABREP78334 506 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 LACTBP83111 547 aaPredicted RBP7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 LARP4Q71RC2 724 aaKnown RBP eCLIP7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 GSTCDQ8NEC7 633 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 SLC7A14Q8TBB6 771 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 SCLYQ96I15 445 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 AMNQ9BXJ7 453 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 DEF6Q9H4E7 631 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 SIRPGQ9P1W8 387 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 ATP23Q9Y6H3 246 aa7.12□□□□□ -1.27
DEPDC1B-203ENST00000505017 ARHGEF11O15085 1522 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 SLPIP03973 132 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 ATP2B1P20020 1258 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 TACR2P21452 398 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 RBL2Q08999 1139 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 DUSP8Q13202 625 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 STILQ15468 1287 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 LRSAM1Q6UWE0 723 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 TAX1BP1Q86VP1 789 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 NOSTRINQ8IVI9 506 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 CARD11Q9BXL7 1154 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 PLB1Q6P1J6 1458 aa7.11□□□□□ -1.27
DEPDC1B-203ENST00000505017 TTBK1Q5TCY1 1321 aaPredicted RBP7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 RASSF10A6NK89 507 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 PLSCR1O15162 318 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 RASGRP1O95267 797 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 AMHP03971 560 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 KCNA6P17658 529 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 PTGS1P23219 599 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 ACVRL1P37023 503 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 DNM2P50570 870 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 LONRF2Q1L5Z9 754 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 ABHD17CQ6PCB6 329 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 Q6ZSN1 163 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 FUKQ8N0W3 1084 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 ZDHHC5Q9C0B5 715 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 INCENPQ9NQS7 918 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 SNTG2Q9NY99 539 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 ZFR2Q9UPR6 939 aaKnown RBP7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 TESMINQ9Y4I5 508 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 CDK13Q14004 1512 aaKnown RBP7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 UHRF1BP1LA0JNW5 1464 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 NCOA2Q15596 1464 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 TROQ12816 1431 aaPredicted RBP7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 MYOM3Q5VTT5 1437 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 UACAQ9BZF9 1416 aa7.1□□□□□ -1.27
DEPDC1B-203ENST00000505017 PHLDB1Q86UU1 1377 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 ADCY10Q96PN6 1610 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 CLASP2O75122 1294 aaKnown RBP7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 GTF2F1P35269 517 aaKnown RBP eCLIP7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 ETV4P43268 484 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 RRADP55042 308 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 KANK2Q63ZY3 851 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 CISD2Q8N5K1 135 aaKnown RBP7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 JMYQ8N9B5 988 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 CFHR4Q92496 578 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 WNK4Q96J92 1243 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 DEPDC7Q96QD5 511 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 CDK5RAP1Q96SZ6 601 aaKnown RBP7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 KIAA1683Q9H0B3 1180 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 GALNT8Q9NY28 637 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 ARHGAP28Q9P2N2 729 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 COQ6Q9Y2Z9 468 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 ABCC2Q92887 1545 aa7.09□□□□□ -1.27
DEPDC1B-203ENST00000505017 FGD6Q6ZV73 1430 aa7.09□□□□□ -1.28
DEPDC1B-203ENST00000505017 MIA2Q96PC5 1412 aa7.09□□□□□ -1.28
DEPDC1B-203ENST00000505017 MAGI3Q5TCQ9 1506 aa7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 MUSKO15146 869 aa7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 MMEP08473 750 aa7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 GJA4P35212 333 aa7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 ZEB1P37275 1124 aaPredicted RBP7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 ADCY8P40145 1251 aa7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 CRY1Q16526 586 aa7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 TRIM61Q5EBN2 209 aa7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 ZC3H7AQ8IWR0 971 aaKnown RBP7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 SORCS2Q96PQ0 1159 aa7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 DNAJC7Q99615 494 aa7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 DPYSL5Q9BPU6 564 aa7.08□□□□□ -1.28
DEPDC1B-203ENST00000505017 ATP10BO94823 1461 aa7.07□□□□□ -1.28
DEPDC1B-203ENST00000505017 CUTAO60888 179 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms