RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 GPR20Q99678 358 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 PCDHB15Q9Y5E8 787 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 FRMPD4Q14CM0 1322 aa6.98□□□□□ -1.29
GYPB-204ENST00000504951 FRMPD2Q68DX3 1309 aaPredicted RBP6.98□□□□□ -1.29
GYPB-204ENST00000504951 CARNS1A5YM72 827 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 RRN3P2A6NIE6 340 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 RBAK-RBAKDNI3L0D1 243 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 FGAP02671 866 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 CTSHP09668 335 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 GHRP10912 638 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 EIF2AK2P19525 551 aaKnown RBP6.97□□□□□ -1.29
GYPB-204ENST00000504951 CCND2P30279 289 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 ERVFC1P60507 584 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 FAM189BP81408 668 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 CTDSPL2Q05D32 466 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 ANGPT1Q15389 498 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 CDC37Q16543 378 aaPredicted RBP6.97□□□□□ -1.29
GYPB-204ENST00000504951 GNPTABQ3T906 1256 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 VPS53Q5VIR6 699 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 IER5Q5VY09 327 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 CWF19L1Q69YN2 538 aaKnown RBP6.97□□□□□ -1.29
GYPB-204ENST00000504951 CES5AQ6NT32 575 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 ZBTB33Q86T24 672 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 ADGRF4Q8IZF3 695 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 NME8Q8N427 588 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 LINC01599Q8WXQ3 324 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 MRPS27Q92552 414 aaKnown RBP6.97□□□□□ -1.29
GYPB-204ENST00000504951 RUBCNQ92622 972 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 CASP10Q92851 521 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 TNPO1Q92973 898 aaKnown RBP6.97□□□□□ -1.29
GYPB-204ENST00000504951 CNTNAP3BQ96NU0 1288 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 AMNQ9BXJ7 453 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 RHOBTB2Q9BYZ6 727 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 CNTNAP3Q9BZ76 1288 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 ELAC1Q9H777 363 aaKnown RBP6.97□□□□□ -1.29
GYPB-204ENST00000504951 AGO3Q9H9G7 860 aaKnown RBP6.97□□□□□ -1.29
GYPB-204ENST00000504951 PUF60Q9UHX1 559 aaKnown RBP6.97□□□□□ -1.29
GYPB-204ENST00000504951 PCDHB3Q9Y5E6 796 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 CCDC171Q6TFL3 1326 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 IGSF9BQ9UPX0 1349 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 CHD8Q9HCK8 2581 aa6.97□□□□□ -1.29
GYPB-204ENST00000504951 C2CD4DB7Z1M9 353 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 NOP56O00567 594 aaKnown RBP6.96□□□□□ -1.3
GYPB-204ENST00000504951 FGF18O76093 207 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 SCG2P13521 617 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 TECP42680 631 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 SARSP49591 514 aaKnown RBP6.96□□□□□ -1.3
GYPB-204ENST00000504951 ARHGAP4P98171 946 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 QRICH1Q2TAL8 776 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 USH1GQ495M9 461 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 ODR4Q5SWX8 454 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 MARCH8Q5T0T0 291 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 KIAA1841Q6NSI8 718 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 ZC3H14Q6PJT7 736 aaKnown RBP6.96□□□□□ -1.3
GYPB-204ENST00000504951 RBM23Q86U06 439 aaKnown RBP6.96□□□□□ -1.3
GYPB-204ENST00000504951 MICAL1Q8TDZ2 1067 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 RSPH1Q8WYR4 309 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 JMJD4Q9H9V9 463 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 HELLSQ9NRZ9 838 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 C1orf112Q9NSG2 853 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 WNT16Q9UBV4 365 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 PADI3Q9ULW8 664 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 IRAK3Q9Y616 596 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 DMXL1Q9Y485 3027 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 KAT6AQ92794 2004 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 SALL3Q9BXA9 1300 aa6.96□□□□□ -1.3
GYPB-204ENST00000504951 PRR5-ARHGAP8B1AHC4 643 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 PER2O15055 1255 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 MAFGO15525 162 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 FIBPO43427 364 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 PAPLNO95428 1278 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 EOMESO95936 686 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 CFBP00751 764 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 LAG3P18627 525 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 PPM1AP35813 382 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 MRPS6P82932 125 aaKnown RBP6.95□□□□□ -1.3
GYPB-204ENST00000504951 ARHGAP8P85298 464 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 TDGQ13569 410 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 GIT2Q14161 759 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 ATAT1Q5SQI0 421 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 KIAA0319Q5VV43 1072 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 PHLDB3Q6NSJ2 640 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 CYP26C1Q6V0L0 522 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 RUFY4Q6ZNE9 571 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 SLC24A5Q71RS6 500 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 MRPL43Q8N983 215 aaKnown RBP6.95□□□□□ -1.3
GYPB-204ENST00000504951 ESR2Q92731 530 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 NXPE3Q969Y0 559 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 UBA5Q9GZZ9 404 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 MFSD1Q9H3U5 465 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 RNF41Q9H4P4 317 aaPredicted RBP6.95□□□□□ -1.3
GYPB-204ENST00000504951 POMKQ9H5K3 350 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 CWH43Q9H720 699 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 CYP26B1Q9NR63 512 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 RGS18Q9NS28 235 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 DZANK1Q9NVP4 752 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 ERAP1Q9NZ08 941 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 IGSF9Q9P2J2 1179 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 DUSP12Q9UNI6 340 aa6.95□□□□□ -1.3
GYPB-204ENST00000504951 MTMR7Q9Y216 660 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms