RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 CACNB2Q08289 660 aaPredicted RBP5.07□□□□□ -1.6
RFC1-208ENST00000504849 FOXE3Q13461 319 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 MTMR1Q13613 665 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 CNGB1Q14028 1251 aaPredicted RBP5.07□□□□□ -1.6
RFC1-208ENST00000504849 GLIPR1L2Q4G1C9 344 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 TRIM61Q5EBN2 209 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 SYCP2LQ5T4T6 812 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 FOXB2Q5VYV0 432 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 OVOS1Q6IE37 1185 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 CNNM4Q6P4Q7 775 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 C11orf96Q7Z7L8 435 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 C14orf80Q86SX3 495 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 DNAJC10Q8IXB1 793 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 KLHL6Q8WZ60 621 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 ATG4CQ96DT6 458 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 TSPAN17Q96FV3 270 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 SCYL1Q96KG9 808 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 CLUHP3Q96NS8 147 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 GORASP1Q9BQQ3 440 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 CNNM2Q9H8M5 875 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 ARHGEF4Q9NR80 690 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 CHST7Q9NS84 486 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 TERF2IPQ9NYB0 399 aa5.07□□□□□ -1.6
RFC1-208ENST00000504849 ZNF214Q9UL59 606 aaPredicted RBP5.07□□□□□ -1.6
RFC1-208ENST00000504849 NINLQ9Y2I6 1382 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 KIAA0556O60303 1618 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 RAPGEF6Q8TEU7 1601 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 SRCAPQ6ZRS2 3230 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 ITKQ08881 620 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 ABHD18Q0P651 414 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 ZYXQ15942 572 aaKnown RBP5.06□□□□□ -1.6
RFC1-208ENST00000504849 GFOD2Q3B7J2 385 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 FAM209AQ5JX71 171 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 MCTP2Q6DN12 878 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 ZBTB46Q86UZ6 589 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 CIR1Q86X95 450 aaPredicted RBP5.06□□□□□ -1.6
RFC1-208ENST00000504849 SPATS2Q86XZ4 545 aaKnown RBP5.06□□□□□ -1.6
RFC1-208ENST00000504849 TXNDC5Q8NBS9 432 aaKnown RBP5.06□□□□□ -1.6
RFC1-208ENST00000504849 ZNF503Q96F45 646 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 DDX11Q96FC9 970 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 SYT3Q9BQG1 590 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 AARSD1Q9BTE6 412 aaKnown RBP5.06□□□□□ -1.6
RFC1-208ENST00000504849 RXFP1Q9HBX9 757 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 GNL3LQ9NVN8 582 aaKnown RBP5.06□□□□□ -1.6
RFC1-208ENST00000504849 KIAA0586Q9BVV6 1533 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 PTPRMP28827 1452 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 BCORL1Q5H9F3 1711 aa5.06□□□□□ -1.6
RFC1-208ENST00000504849 E9PCH4 1651 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 NUP155O75694 1391 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 ADCY10Q96PN6 1610 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 EIF2AK4Q9P2K8 1649 aaKnown RBP5.05□□□□□ -1.6
RFC1-208ENST00000504849 MED1Q15648 1581 aaPredicted RBP5.05□□□□□ -1.6
RFC1-208ENST00000504849 ST20-MTHFSA0A0A6YYL1 179 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 A0A1W2PQU0 124 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 MEIS1O00470 390 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 NARSO43776 548 aaKnown RBP5.05□□□□□ -1.6
RFC1-208ENST00000504849 TSPY4P0CV99 314 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 TSPY10P0CW01 314 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 GLI4P10075 376 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 FGFR1P11362 822 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 SDSP20132 328 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 TACR1P25103 407 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 GBP1P32455 592 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 HSPA2P54652 639 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 TMF1P82094 1093 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 STRN3Q13033 797 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 MLC1Q15049 377 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 WDR43Q15061 677 aaKnown RBP eCLIP5.05□□□□□ -1.6
RFC1-208ENST00000504849 GNPTABQ3T906 1256 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 CXorf57Q6NSI4 855 aaKnown RBP5.05□□□□□ -1.6
RFC1-208ENST00000504849 CRTC3Q6UUV7 619 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 STRA8Q7Z7C7 330 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 FAM124AQ86V42 546 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 DGKHQ86XP1 1220 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 MAGEB6Q8N7X4 407 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 LEO1Q8WVC0 666 aaPredicted RBP5.05□□□□□ -1.6
RFC1-208ENST00000504849 MTMR8Q96EF0 704 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 DHRS1Q96LJ7 313 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 SLC9A7Q96T83 725 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 TRIM8Q9BZR9 551 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 UPF2Q9HAU5 1272 aaKnown RBP5.05□□□□□ -1.6
RFC1-208ENST00000504849 AASDHPPTQ9NRN7 309 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 SFMBT1Q9UHJ3 866 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 ZFR2Q9UPR6 939 aaKnown RBP5.05□□□□□ -1.6
RFC1-208ENST00000504849 NUP153P49790 1475 aaKnown RBP5.05□□□□□ -1.6
RFC1-208ENST00000504849 CROCC2H7BZ55 1655 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 NUP160Q12769 1436 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 C9orf84Q5VXU9 1444 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 LAMC1P11047 1609 aa5.05□□□□□ -1.6
RFC1-208ENST00000504849 CEP170Q5SW79 1584 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 MAPK8IP3Q9UPT6 1336 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 GPATCH8Q9UKJ3 1502 aaKnown RBP5.04□□□□□ -1.6
RFC1-208ENST00000504849 A0A1W2PQ27 194 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 A0A1W2PQ64 194 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 A0A1W2PQC6 194 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 A0A1W2PQD8 194 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 CCDC189A1A4V9 331 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 ANKRD34BA5PLL1 514 aa5.04□□□□□ -1.6
RFC1-208ENST00000504849 NPEPPSL1A6NEC2 478 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms