RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 DGAT1O75907 488 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 MARK3P27448 753 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 GTF2F1P35269 517 aaKnown RBP eCLIP10.43□□□□□ -0.74
DHFR-202ENST00000504396 BMPR1AP36894 532 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 DLX2Q07687 328 aaPredicted RBP10.43□□□□□ -0.74
DHFR-202ENST00000504396 HYAL1Q12794 435 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 KCNH2Q12809 1159 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 SMAD2Q15796 467 aaKnown RBP10.43□□□□□ -0.74
DHFR-202ENST00000504396 RSPH3Q86UC2 560 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 SMC5Q8IY18 1101 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 PPP2R3CQ969Q6 453 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 MRGPRX2Q96LB1 330 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 KCNH6Q9H252 994 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 CD207Q9UJ71 328 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 NRCAMQ92823 1304 aa10.43□□□□□ -0.74
DHFR-202ENST00000504396 PALM3A6NDB9 673 aaPredicted RBP10.42□□□□□ -0.74
DHFR-202ENST00000504396 SPATA31C2B4DYI2 1134 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 IFIT3O14879 490 aaKnown RBP10.42□□□□□ -0.74
DHFR-202ENST00000504396 LINC01565O15544 149 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 TBX10O75333 385 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 RB1P06400 928 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 ICAM3P32942 547 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 LTBRP36941 435 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 WNT7BP56706 349 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 IGBP1P78318 339 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 MRPS9P82933 396 aaKnown RBP10.42□□□□□ -0.74
DHFR-202ENST00000504396 PPFIA1Q13136 1202 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 SMAD4Q13485 552 aaKnown RBP10.42□□□□□ -0.74
DHFR-202ENST00000504396 GRM4Q14833 912 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 COL19A1Q14993 1142 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 PAN2Q504Q3 1202 aaKnown RBP10.42□□□□□ -0.74
DHFR-202ENST00000504396 TAF2Q6P1X5 1199 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 RUFY4Q6ZNE9 571 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 CYB5R4Q7L1T6 521 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 RALYLQ86SE5 291 aaKnown RBP10.42□□□□□ -0.74
DHFR-202ENST00000504396 RNF135Q8IUD6 432 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 RWDD1Q9H446 243 aaPredicted RBP10.42□□□□□ -0.74
DHFR-202ENST00000504396 ALG13Q9NP73 1137 aaKnown RBP10.42□□□□□ -0.74
DHFR-202ENST00000504396 TUBE1Q9UJT0 475 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 TELO2Q9Y4R8 837 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 PIEZO1Q92508 2521 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 FRMPD4Q14CM0 1322 aa10.42□□□□□ -0.74
DHFR-202ENST00000504396 PNMA6FA0A0J9YX94 578 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 C5orf67F2Z3F1 127 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 M0QZ92 97 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 CHRNA1P02708 482 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 MMP1P03956 469 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 CTHP32929 405 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 TCF7P36402 384 aaPredicted RBP10.41□□□□□ -0.74
DHFR-202ENST00000504396 LPIN1Q14693 890 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 WTAPQ15007 396 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 SART3Q15020 963 aaKnown RBP10.41□□□□□ -0.74
DHFR-202ENST00000504396 SEC23AQ15436 765 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 FAM26DQ5JW98 314 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 NLRX1Q86UT6 975 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 CHD1LQ86WJ1 897 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 PLEKHM2Q8IWE5 1019 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 SUGP1Q8IWZ8 645 aaKnown RBP10.41□□□□□ -0.74
DHFR-202ENST00000504396 DNAJB3Q8WWF6 145 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 GLG1Q92896 1179 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 INPP4AQ96PE3 977 aaPredicted RBP10.41□□□□□ -0.74
DHFR-202ENST00000504396 FAM49AQ9H0Q0 323 aaPredicted RBP10.41□□□□□ -0.74
DHFR-202ENST00000504396 RIOX1Q9H6W3 641 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 SEC63Q9UGP8 760 aaKnown RBP10.41□□□□□ -0.74
DHFR-202ENST00000504396 KIAA1671Q9BY89 1806 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 TTC24A2A3L6 582 aaPredicted RBP10.41□□□□□ -0.74
DHFR-202ENST00000504396 RPLP2P05387 115 aaKnown RBP10.41□□□□□ -0.74
DHFR-202ENST00000504396 SEMA3FQ13275 785 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 GRIK4Q16099 956 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 CTC1Q2NKJ3 1217 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 LINC01559Q495D7 138 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 XRRA1Q6P2D8 792 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 CATIPQ7Z7H3 387 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 GIMAP8Q8ND71 665 aaPredicted RBP10.41□□□□□ -0.74
DHFR-202ENST00000504396 PLVAPQ9BX97 442 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 MAP10Q9P2G4 905 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 LRFN2Q9ULH4 789 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 CDY2AQ9Y6F7 541 aa10.41□□□□□ -0.74
DHFR-202ENST00000504396 ENPP3O14638 875 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 CYTH3O43739 400 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 PPFIA3O75145 1194 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 CD52P31358 61 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 MRPS6P82932 125 aaKnown RBP10.4□□□□□ -0.75
DHFR-202ENST00000504396 NUCB1Q02818 461 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 TMEM62Q0P6H9 643 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 SLC35G1Q2M3R5 365 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 HERC4Q5GLZ8 1057 aaPredicted RBP10.4□□□□□ -0.75
DHFR-202ENST00000504396 SPOUT1Q5T280 376 aaKnown RBP10.4□□□□□ -0.75
DHFR-202ENST00000504396 PCNX4Q63HM2 1172 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 USP17L6PQ6QN14 398 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 TSHZ1Q6ZSZ6 1077 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 FAM43BQ6ZT52 329 aaPredicted RBP10.4□□□□□ -0.75
DHFR-202ENST00000504396 RBM23Q86U06 439 aaKnown RBP10.4□□□□□ -0.75
DHFR-202ENST00000504396 MICAL1Q8TDZ2 1067 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 CLP1Q92989 425 aaKnown RBP10.4□□□□□ -0.75
DHFR-202ENST00000504396 PBXIP1Q96AQ6 731 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 RRP36Q96EU6 259 aaKnown RBP10.4□□□□□ -0.75
DHFR-202ENST00000504396 SENP7Q9BQF6 1050 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 ERAP1Q9NZ08 941 aa10.4□□□□□ -0.75
DHFR-202ENST00000504396 MRPL42Q9Y6G3 142 aaKnown RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms