RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PLIN4Q96Q06 1357 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 RAD50Q92878 1312 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 CFAP54Q96N23 3096 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 TECTAO75443 2155 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 ELOA3CA0A087WX78 387 aaPredicted RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 MED19A0JLT2 244 aaPredicted RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 ELOA3DA6NLF2 546 aaPredicted RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 GSG1L2A8MUP6 293 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 GRM6O15303 877 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 SMARCA5O60264 1052 aaPredicted RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 KRT37O76014 449 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 TTLL1O95922 423 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 APPP05067 770 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 ARP10275 920 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 LTBRP36941 435 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 NDUFV1P49821 464 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 OAZ1P54368 228 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 NR1H3Q13133 447 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 PTPROQ16827 1216 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 LY6KQ17RY6 165 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 ELOA3BQ3SY89 546 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 PAN2Q504Q3 1202 aaKnown RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 HERC4Q5GLZ8 1057 aaPredicted RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 ZNF468Q5VIY5 522 aaPredicted RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 IQSEC1Q6DN90 963 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 SEPT14Q6ZU15 432 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 FBXO11Q86XK2 927 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 TRMT2AQ8IZ69 625 aaKnown RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 GMCL1P1Q8NEA9 526 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 DBF4BQ8NFT6 615 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 ELOA3Q8NG57 546 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 C1orf216Q8TAB5 229 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 AFAP1L1Q8TED9 768 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 KAT2BQ92831 832 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 OSBP2Q969R2 916 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 PABPC5Q96DU9 382 aaKnown RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 MFSD14AQ96MC6 490 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 SEC62Q99442 399 aaKnown RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.29□□□□□ -1.72
USP46-205ENST00000504078 ALG13Q9NP73 1137 aaKnown RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 MTMR4Q9NYA4 1195 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 STX8Q9UNK0 236 aa4.29□□□□□ -1.72
USP46-205ENST00000504078 SUPT16HQ9Y5B9 1047 aaKnown RBP4.29□□□□□ -1.72
USP46-205ENST00000504078 PRR23AA6NEV1 266 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 ATXN7O15265 892 aaPredicted RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 GPAA1O43292 621 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 AMHP03971 560 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 TXNP10599 105 aaKnown RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 THPOP40225 353 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 PLA2G4AP47712 749 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 GATMP50440 423 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 RPS6P62753 249 aaKnown RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 TFAP4Q01664 338 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 TNP2Q05952 138 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 ARHGAP1Q07960 439 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 SMAD4Q13485 552 aaKnown RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 IKBKEQ14164 716 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 KIAA0753Q2KHM9 967 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 TRIM71Q2Q1W2 868 aaKnown RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 RRP12Q5JTH9 1297 aaKnown RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 SYDE2Q5VT97 1194 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 ZKSCAN2Q63HK3 967 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 NFRKBQ6P4R8 1299 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 FRMD5Q7Z6J6 570 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 RBM23Q86U06 439 aaKnown RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 FAM160B2Q86V87 743 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 TRIM50Q86XT4 487 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 ERC1Q8IUD2 1116 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 DHX37Q8IY37 1157 aaKnown RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 TMEM192Q8IY95 271 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 ZNF444Q8N0Y2 327 aaPredicted RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 CLASRPQ8N2M8 674 aaKnown RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 FBXL6Q8N531 539 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 CAGE1Q8TC20 777 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 SCFD2Q8WU76 684 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 STAG1Q8WVM7 1258 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 CLEC4DQ8WXI8 215 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 RPGRIP1Q96KN7 1286 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 HAUS7Q99871 368 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 IFIH1Q9BYX4 1025 aaKnown RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 KDM4CQ9H3R0 1056 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 TOMM22Q9NS69 142 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 DNAAF2Q9NVR5 837 aaKnown RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 LMCD1Q9NZU5 365 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 COL20A1Q9P218 1284 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 GTF2IRD1Q9UHL9 959 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 CD207Q9UJ71 328 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 USP15Q9Y4E8 981 aaPredicted RBP4.28□□□□□ -1.72
USP46-205ENST00000504078 DOCK5Q9H7D0 1870 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 PLXNA4Q9HCM2 1894 aa4.28□□□□□ -1.72
USP46-205ENST00000504078 NCOR1O75376 2440 aa4.27□□□□□ -1.73
USP46-205ENST00000504078 ADGRA3Q8IWK6 1321 aa4.27□□□□□ -1.73
USP46-205ENST00000504078 ABHD14A-ACY1A0A1B0GW23 586 aa4.27□□□□□ -1.73
USP46-205ENST00000504078 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.27□□□□□ -1.73
USP46-205ENST00000504078 TSPY2A6NKD2 308 aa4.27□□□□□ -1.73
USP46-205ENST00000504078 H3BNC9 293 aa4.27□□□□□ -1.73
USP46-205ENST00000504078 IPO8O15397 1037 aaKnown RBP4.27□□□□□ -1.73
USP46-205ENST00000504078 GLP2RO95838 553 aa4.27□□□□□ -1.73
USP46-205ENST00000504078 CXCL10P02778 98 aa4.27□□□□□ -1.73
USP46-205ENST00000504078 ICAM1P05362 532 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms