RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 APEX1P27695 318 aaKnown RBP4.39□□□□□ -1.71
ATXN3-208ENST00000504047 KPNA1P52294 538 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-208ENST00000504047 ALDH6A1Q02252 535 aaKnown RBP4.39□□□□□ -1.71
ATXN3-208ENST00000504047 ROM1Q03395 351 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 USP10Q14694 798 aaKnown RBP4.39□□□□□ -1.71
ATXN3-208ENST00000504047 PCBP1Q15365 356 aaKnown RBP eCLIP4.39□□□□□ -1.71
ATXN3-208ENST00000504047 STILQ15468 1287 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 TTC38Q5R3I4 469 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 ARHGEF18Q6ZSZ5 1173 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 FERMT3Q86UX7 667 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 C11orf74Q86VG3 221 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 NXPE1Q8N323 547 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 RELTQ969Z4 430 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 AJUBAQ96IF1 538 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 C20orf173Q96LM9 149 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 CARD11Q9BXL7 1154 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 KATNBL1Q9H079 304 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 TMX1Q9H3N1 280 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 TOMM22Q9NS69 142 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 OXSMQ9NWU1 459 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 ZNF536O15090 1300 aa4.39□□□□□ -1.71
ATXN3-208ENST00000504047 A0A0G2JNJ9 132 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 ZNF891A8MT65 544 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-208ENST00000504047 DVL2O14641 736 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 B4GALT3O60512 393 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 B4GALT4O60513 344 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 HMGCRP04035 888 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 ATP2A2P16615 1042 aaKnown RBP4.38□□□□□ -1.71
ATXN3-208ENST00000504047 SYN1P17600 705 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 SOX5P35711 763 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 ADCY8P40145 1251 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 ETV4P43268 484 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 IL2P60568 153 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 DSG1Q02413 1049 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 TOP3AQ13472 1001 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-208ENST00000504047 EPHA7Q15375 998 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 ZMAT1Q5H9K5 638 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 GRAMD4Q6IC98 578 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 TIGD7Q6NT04 549 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-208ENST00000504047 LRSAM1Q6UWE0 723 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 PHYKPLQ8IUZ5 450 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 EFHBQ8N7U6 833 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 C7orf31Q8N865 590 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 CXorf38Q8TB03 319 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 CHTF18Q8WVB6 975 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 LEO1Q8WVC0 666 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-208ENST00000504047 TUBGCP5Q96RT8 1024 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 ELF4Q99607 663 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-208ENST00000504047 AMNQ9BXJ7 453 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 MTFR1LQ9H019 292 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 JADE2Q9NQC1 790 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 THG1LQ9NWX6 298 aaKnown RBP4.38□□□□□ -1.71
ATXN3-208ENST00000504047 Q9UFV3 132 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 DUSP10Q9Y6W6 482 aa4.38□□□□□ -1.71
ATXN3-208ENST00000504047 A0A087X0B3 334 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 LAMTOR5O43504 91 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 PRICKLE3O43900 615 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-208ENST00000504047 PLATP00750 562 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 PRLP01236 227 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 CELA3BP08861 270 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 CD40P25942 277 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 PTX3P26022 381 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-208ENST00000504047 MEOX1P50221 254 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 KCNQ1P51787 676 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 PPP2CBP62714 309 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 PPP2CAP67775 309 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 CD83Q01151 205 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 SLC6A3Q01959 620 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 PLP2Q04941 152 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 MOGSQ13724 837 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 PRAMEF9Q5VWM5 478 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 SLFN12LQ6IEE8 588 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 DDX46Q7L014 1031 aaKnown RBP4.37□□□□□ -1.71
ATXN3-208ENST00000504047 RTN4RL1Q86UN2 441 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-208ENST00000504047 RTKN2Q8IZC4 609 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 RPGRQ92834 1020 aaKnown RBP4.37□□□□□ -1.71
ATXN3-208ENST00000504047 USP7Q93009 1102 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 FOXRED1Q96CU9 486 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-208ENST00000504047 MBD6Q96DN6 1003 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 MAML3Q96JK9 1138 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 C16orf92Q96LL3 132 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 GPR101Q96P66 508 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-208ENST00000504047 BDH2Q9BUT1 245 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
ATXN3-208ENST00000504047 FAM83GA6ND36 823 aa4.36□□□□□ -1.71
ATXN3-208ENST00000504047 GSG1L2A8MUP6 293 aa4.36□□□□□ -1.71
ATXN3-208ENST00000504047 FOXD2O60548 495 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-208ENST00000504047 MAFO75444 373 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-208ENST00000504047 CPEP16870 476 aa4.36□□□□□ -1.71
ATXN3-208ENST00000504047 CSF2RBP32927 897 aa4.36□□□□□ -1.71
ATXN3-208ENST00000504047 LSSP48449 732 aa4.36□□□□□ -1.71
ATXN3-208ENST00000504047 RRADP55042 308 aa4.36□□□□□ -1.71
ATXN3-208ENST00000504047 EIF4HQ15056 248 aaKnown RBP4.36□□□□□ -1.71
ATXN3-208ENST00000504047 DHCR24Q15392 516 aa4.36□□□□□ -1.71
ATXN3-208ENST00000504047 SEPT7Q16181 437 aaKnown RBP4.36□□□□□ -1.71
ATXN3-208ENST00000504047 CT47A1Q5JQC4 288 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-208ENST00000504047 KANK2Q63ZY3 851 aa4.36□□□□□ -1.71
ATXN3-208ENST00000504047 CREB3L3Q68CJ9 461 aa4.36□□□□□ -1.71
ATXN3-208ENST00000504047 TMEM200BQ69YZ2 307 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms