RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 CYTH3O43739 400 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 MGEA5O60502 916 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 SDSP20132 328 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 KRT17Q04695 432 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 TMC7Q7Z402 723 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 ZDHHC14Q8IZN3 488 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 KCNG4Q8TDN1 519 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 ADAM2Q99965 735 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 AZI2Q9H6S1 392 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 ATP6V0A4Q9HBG4 840 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 ERVK-5Q9HDB9 667 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 LIMD1Q9UGP4 676 aa18.17■□□□□ 0.5
PDLIM7-210ENST00000503827 SMIM35A0A1B0GVV1 85 aa18.16■□□□□ 0.5
PDLIM7-210ENST00000503827 RPS6KA5O75582 802 aa18.16■□□□□ 0.5
PDLIM7-210ENST00000503827 AOC1P19801 751 aa18.16■□□□□ 0.5
PDLIM7-210ENST00000503827 ANGPT1Q15389 498 aa18.16■□□□□ 0.5
PDLIM7-210ENST00000503827 CWF19L1Q69YN2 538 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-210ENST00000503827 USP17L6PQ6QN14 398 aa18.16■□□□□ 0.5
PDLIM7-210ENST00000503827 RMDN1Q96DB5 314 aa18.16■□□□□ 0.5
PDLIM7-210ENST00000503827 SEMA4AQ9H3S1 761 aa18.16■□□□□ 0.5
PDLIM7-210ENST00000503827 GINS2Q9Y248 185 aa18.16■□□□□ 0.5
PDLIM7-210ENST00000503827 HCFC2Q9Y5Z7 792 aa18.16■□□□□ 0.5
PDLIM7-210ENST00000503827 EVPLQ92817 2033 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 C9IYK1 514 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 PIK3CDO00329 1044 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 PDE4AP27815 886 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 PPM1AP35813 382 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 CCDC105Q8IYK2 499 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 TRAPPC12Q8WVT3 735 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 PIBF1Q8WXW3 757 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 DSCC1Q9BVC3 393 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 TMEM161AQ9NX61 479 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 PKD2L1Q9P0L9 805 aa18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 DBR1Q9UK59 544 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-210ENST00000503827 GPR182O15218 404 aa18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 LMNAP02545 664 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 FGFR1P11362 822 aa18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 ITGB5P18084 799 aa18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 MTMR1Q13613 665 aa18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 SMC1AQ14683 1233 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 KCNT2Q6UVM3 1135 aa18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 CWC27Q6UX04 472 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 ZNF558Q96NG5 402 aa18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 PCYT2Q99447 389 aa18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 RTP3Q9BQQ7 232 aa18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 ELAC1Q9H777 363 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 USTQ9Y2C2 406 aa18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 NOC2LQ9Y3T9 749 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-210ENST00000503827 MEIS2O14770 477 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 MAFGO15525 162 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 PI15O43692 258 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 PUM1Q14671 1186 aaKnown RBP eCLIP18.13■□□□□ 0.493e-7■□□□□ 10.6
PDLIM7-210ENST00000503827 PLCB4Q15147 1175 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 ATAT1Q5SQI0 421 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 RARS2Q5T160 578 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 KIAA1841Q6NSI8 718 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 MTHFD1LQ6UB35 978 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 CYB5R4Q7L1T6 521 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 MRPL43Q8N983 215 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 DTWD2Q8NBA8 298 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 TMEM117Q9H0C3 514 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 JPH1Q9HDC5 661 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 CYP26B1Q9NR63 512 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 ST3GAL5Q9UNP4 418 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 DENND4AQ7Z401 1863 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 ZNF292O60281 2723 aa18.13■□□□□ 0.49
PDLIM7-210ENST00000503827 HOXA2O43364 376 aa18.12■□□□□ 0.49
PDLIM7-210ENST00000503827 WEE2P0C1S8 567 aa18.12■□□□□ 0.49
PDLIM7-210ENST00000503827 BMS1Q14692 1282 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-210ENST00000503827 PLPPR4Q7Z2D5 763 aa18.12■□□□□ 0.49
PDLIM7-210ENST00000503827 KIAA2013Q8IYS2 634 aa18.12■□□□□ 0.49
PDLIM7-210ENST00000503827 DIAPH3Q9NSV4 1193 aa18.12■□□□□ 0.49
PDLIM7-210ENST00000503827 SPG21Q9NZD8 308 aa18.12■□□□□ 0.49
PDLIM7-210ENST00000503827 UBIAD1Q9Y5Z9 338 aa18.12■□□□□ 0.49
PDLIM7-210ENST00000503827 CACNA1BQ00975 2339 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 ERICH2A1L162 156 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 C2orf71A6NGG8 1288 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 CLASP2O75122 1294 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 EOMESO95936 686 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 NPR3P17342 541 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 KLRC1P26715 233 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 CA8P35219 290 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 STAT5BP51692 787 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 FAM189BP81408 668 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 TRDNQ13061 729 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 LRRC55Q6ZSA7 311 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 ABI1Q8IZP0 508 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 LRRC43Q8N309 656 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 ACSF2Q96CM8 615 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 CDHR5Q9HBB8 845 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 DZANK1Q9NVP4 752 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 SLC9A2Q9UBY0 812 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 FBXL21Q9UKT6 434 aa18.11■□□□□ 0.49
PDLIM7-210ENST00000503827 IFIT3O14879 490 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-210ENST00000503827 PBX3P40426 434 aa18.1■□□□□ 0.49
PDLIM7-210ENST00000503827 TROAPQ12815 778 aa18.1■□□□□ 0.49
PDLIM7-210ENST00000503827 TDGQ13569 410 aa18.1■□□□□ 0.49
PDLIM7-210ENST00000503827 C12orf76Q8N812 135 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-210ENST00000503827 TMEM87AQ8NBN3 555 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms