RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 DNM1Q05193 864 aaKnown RBP18.46■□□□□ 0.55
SCLT1-205ENST00000503401 ECM1Q16610 540 aa18.46■□□□□ 0.55
SCLT1-205ENST00000503401 POTEGQ6S5H5 508 aa18.46■□□□□ 0.55
SCLT1-205ENST00000503401 SNX29Q8TEQ0 813 aa18.46■□□□□ 0.55
SCLT1-205ENST00000503401 DNAJB3Q8WWF6 145 aa18.46■□□□□ 0.55
SCLT1-205ENST00000503401 ZNF396Q96N95 335 aaPredicted RBP18.46■□□□□ 0.55
SCLT1-205ENST00000503401 NIFKQ9BYG3 293 aaKnown RBP18.46■□□□□ 0.55
SCLT1-205ENST00000503401 FAM49AQ9H0Q0 323 aaPredicted RBP18.46■□□□□ 0.55
SCLT1-205ENST00000503401 DKC1O60832 514 aaKnown RBP eCLIP18.45■□□□□ 0.54
SCLT1-205ENST00000503401 C22orf31O95567 290 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 CTSHP09668 335 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 CCT6AP40227 531 aaKnown RBP18.45■□□□□ 0.54
SCLT1-205ENST00000503401 NASPP49321 788 aaPredicted RBP18.45■□□□□ 0.54
SCLT1-205ENST00000503401 BFSP2Q13515 415 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 TARBP2Q15633 366 aaKnown RBP18.45■□□□□ 0.54
SCLT1-205ENST00000503401 ZRSR1Q15695 479 aaKnown RBP18.45■□□□□ 0.54
SCLT1-205ENST00000503401 CAGE1Q8TC20 777 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 PIGOQ8TEQ8 1089 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 LBHD1Q9BQE6 289 aaPredicted RBP18.45■□□□□ 0.54
SCLT1-205ENST00000503401 MMTAG2Q9BU76 263 aaKnown RBP18.45■□□□□ 0.54
SCLT1-205ENST00000503401 POLR3CQ9BUI4 534 aaPredicted RBP18.45■□□□□ 0.54
SCLT1-205ENST00000503401 TUFT1Q9NNX1 390 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 LOXHD1Q8IVV2 1947 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 TET1Q8NFU7 2136 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 RPA1P27694 616 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 TMEM62Q0P6H9 643 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 SLC39A14Q15043 492 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 STK38Q15208 465 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 SPECC1Q5M775 1068 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 ZNF618Q5T7W0 954 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 HAUS3Q68CZ6 603 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 MFSD5Q6N075 450 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 LRRC71Q8N4P6 559 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 METTL13Q8N6R0 699 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 CEP170P1Q96L14 293 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 CLIC6Q96NY7 704 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 CEP89Q96ST8 783 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 CYP26B1Q9NR63 512 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 BMP2KQ9NSY1 1161 aaPredicted RBP18.45■□□□□ 0.54
SCLT1-205ENST00000503401 FBXO2Q9UK22 296 aaPredicted RBP18.45■□□□□ 0.54
SCLT1-205ENST00000503401 PCDHA2Q9Y5H9 948 aa18.45■□□□□ 0.54
SCLT1-205ENST00000503401 SIP14410 1827 aa18.44■□□□□ 0.54
SCLT1-205ENST00000503401 PITPNM1O00562 1244 aa18.44■□□□□ 0.54
SCLT1-205ENST00000503401 CSF2RAP15509 400 aa18.44■□□□□ 0.54
SCLT1-205ENST00000503401 CLCN3P51790 818 aa18.44■□□□□ 0.54
SCLT1-205ENST00000503401 KRT79Q5XKE5 535 aa18.44■□□□□ 0.54
SCLT1-205ENST00000503401 TAF2Q6P1X5 1199 aa18.44■□□□□ 0.54
SCLT1-205ENST00000503401 CCDC155Q8N6L0 562 aa18.44■□□□□ 0.54
SCLT1-205ENST00000503401 RETREG2Q8NC44 543 aa18.44■□□□□ 0.54
SCLT1-205ENST00000503401 LINC00301Q8NCQ3 95 aa18.44■□□□□ 0.54
SCLT1-205ENST00000503401 LYPLA2O95372 231 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 IQCF3P0C7M6 154 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 TBC1D8BQ0IIM8 1120 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 XKR9Q5GH70 373 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 EFCAB12Q6NXP0 572 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 TRAF7Q6Q0C0 670 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 LRRC8DQ7L1W4 858 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 PLIN2Q99541 437 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 CSRNP2Q9H175 543 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 SUGCTQ9HAC7 445 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 KIAA1024Q9UPX6 916 aa18.43■□□□□ 0.54
SCLT1-205ENST00000503401 SELPP16109 830 aa18.42■□□□□ 0.54
SCLT1-205ENST00000503401 EPHB4P54760 987 aa18.42■□□□□ 0.54
SCLT1-205ENST00000503401 RBL2Q08999 1139 aa18.42■□□□□ 0.54
SCLT1-205ENST00000503401 DRP2Q13474 957 aa18.42■□□□□ 0.54
SCLT1-205ENST00000503401 OTUD6AQ7L8S5 288 aa18.42■□□□□ 0.54
SCLT1-205ENST00000503401 TMEM199Q8N511 208 aa18.42■□□□□ 0.54
SCLT1-205ENST00000503401 PPP1R16BQ96T49 567 aa18.42■□□□□ 0.54
SCLT1-205ENST00000503401 DDX19AQ9NUU7 478 aaKnown RBP18.42■□□□□ 0.54
SCLT1-205ENST00000503401 SRPRBQ9Y5M8 271 aaKnown RBP18.42■□□□□ 0.54
SCLT1-205ENST00000503401 SMIM35A0A1B0GVV1 85 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 SPTLC2O15270 562 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 ACRP10323 421 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 NCLP19338 710 aaKnown RBP18.41■□□□□ 0.54
SCLT1-205ENST00000503401 LONP1P36776 959 aaKnown RBP18.41■□□□□ 0.54
SCLT1-205ENST00000503401 NUCB2P80303 420 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 FPGSQ05932 587 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 CHRDL2Q6WN34 429 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 USP49Q70CQ1 688 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 DEFB128Q7Z7B8 93 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 CABP7Q86V35 215 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 KIAA0319LQ8IZA0 1049 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 EPSTI1Q96J88 318 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 GDF15Q99988 308 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 OSBPL7Q9BZF2 842 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 RSPH10B2B2RC85 870 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 MAGEB2O15479 319 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 YEATS4O95619 227 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 CHRNA1P02708 482 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 VTNP04004 478 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 RSPH10BP0C881 870 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 RARRES1P49788 294 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 MBTPS1Q14703 1052 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 GPNMBQ14956 572 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 PRPF38BQ5VTL8 546 aaKnown RBP18.41■□□□□ 0.54
SCLT1-205ENST00000503401 RSPH3Q86UC2 560 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 KRI1Q8N9T8 703 aaKnown RBP18.41■□□□□ 0.54
SCLT1-205ENST00000503401 AK8Q96MA6 479 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 CCDC43Q96MW1 224 aaKnown RBP18.41■□□□□ 0.54
SCLT1-205ENST00000503401 PNMA5Q96PV4 448 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms