RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 SIK1P57059 783 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 RELQ04864 619 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-203ENST00000502998 LRRC74AQ0VAA2 488 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 E2F2Q14209 437 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 SEMA3AQ14563 771 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 PPP1R7Q15435 360 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 ADRM1Q16186 407 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 LONRF2Q1L5Z9 754 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 TMEM95Q3KNT9 176 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 CAVIN4Q5BKX8 364 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 FAM209AQ5JX71 171 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 DEPDC1Q5TB30 811 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 ZSCAN25Q6NSZ9 544 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 SARM1Q6SZW1 724 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 TAS1R3Q7RTX0 852 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 CATSPER4Q7RTX7 472 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 VPS36Q86VN1 386 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 FCHSD1Q86WN1 690 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 DDX42Q86XP3 938 aaKnown RBP eCLIP7.07□□□□□ -1.28
CLCN3-203ENST00000502998 SPATA2LQ8IUW3 424 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-203ENST00000502998 LINC00116Q8NCU8 138 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 FLAD1Q8NFF5 587 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 CCDC148Q8NFR7 591 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 MDM1Q8TC05 714 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 SPATA17Q96L03 361 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 SERINC2Q96SA4 455 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 ALG1Q9BT22 464 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 NAT10Q9H0A0 1025 aaKnown RBP7.07□□□□□ -1.28
CLCN3-203ENST00000502998 VPS16Q9H269 839 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 VCXQ9H320 206 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 EHMT1Q9H9B1 1298 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.07□□□□□ -1.28
CLCN3-203ENST00000502998 RMND1Q9NWS8 449 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 CTNNAL1Q9UBT7 734 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 RASAL2Q9UJF2 1139 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 RIMKLBQ9ULI2 386 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 ZMYND8Q9ULU4 1186 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-203ENST00000502998 EXOC7Q9UPT5 735 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 PA2G4Q9UQ80 394 aaKnown RBP7.07□□□□□ -1.28
CLCN3-203ENST00000502998 CFL2Q9Y281 166 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 UBR3Q6ZT12 1888 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 ELL2O00472 640 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 COBLO75128 1261 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 ADAMTS4O75173 837 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 TOP1P11387 765 aaKnown RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 KRT10P13645 584 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 RAC2P15153 192 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 RPS2P15880 293 aaKnown RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 ZKSCAN1P17029 563 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 EIF2S2P20042 333 aaKnown RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 HMGB2P26583 209 aaKnown RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 HAAOP46952 286 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 CCNG1P51959 295 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 OLR1P78380 273 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 SKOR1P84550 965 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 GBE1Q04446 702 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 ITPK1Q13572 414 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 NONOQ15233 471 aaKnown RBP eCLIP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 PPP4R4Q6NUP7 873 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 KLC3Q6P597 504 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 ZNF600Q6ZNG1 722 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 KIRREL3Q8IZU9 778 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 FUKQ8N0W3 1084 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 TMEM87AQ8NBN3 555 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 STKLD1Q8NE28 680 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 NCSTNQ92542 709 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 PEX13Q92968 403 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 RNF25Q96BH1 459 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 HGH1Q9BTY7 390 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 CCDC28BQ9BUN5 200 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 OSBPL1AQ9BXW6 950 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 AGXT2Q9BYV1 514 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 NUF2Q9BZD4 464 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 FAM129AQ9BZQ8 928 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 GBA3Q9H227 469 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 TPK1Q9H3S4 243 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 CLSTN2Q9H4D0 955 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 XAB2Q9HCS7 855 aaKnown RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 INIPQ9NRY2 104 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 EURLQ9NYK6 297 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 SAP30BPQ9UHR5 308 aaKnown RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 ZNF180Q9UJW8 692 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 FAM32AQ9Y421 112 aaKnown RBP7.06□□□□□ -1.28
CLCN3-203ENST00000502998 PCDHB4Q9Y5E5 795 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 SLC4A4Q9Y6R1 1079 aa7.06□□□□□ -1.28
CLCN3-203ENST00000502998 KDM6AO15550 1401 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-203ENST00000502998 LRRC72A6NJI9 287 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 ZBTB39O15060 712 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 EXTL3O43909 919 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 SEC31AO94979 1220 aaKnown RBP7.05□□□□□ -1.28
CLCN3-203ENST00000502998 CSPG5O95196 566 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 ARIH2O95376 493 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 GLI1P08151 1106 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 ZSCAN22P10073 491 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-203ENST00000502998 PTGS1P23219 599 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 CHKAP35790 457 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 CAP2P40123 477 aa7.05□□□□□ -1.28
CLCN3-203ENST00000502998 LIFRP42702 1097 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms