RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	TRIML1	Q8N9V2	468 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	PIGO	Q8TEQ8	1089 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	ATP6V0A1	Q93050	837 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	SMARCE1	Q969G3	411 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	LRRC27	Q9C0I9	530 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	BHMT2	Q9H2M3	363 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	ANKEF1	Q9NU02	776 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	EMSY	Q7Z589	1322 aa		13.55	□□□□□ -0.24
MATR3-231	ENST00000502394	FRMD3	A2A2Y4	597 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	DKC1	O60832	514 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	1e-323	■■■■■ 141.5
MATR3-231	ENST00000502394	SMC2	O95347	1197 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	RPN1	P04843	607 aa	Known RBP	13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	TCF7	P36402	384 aa	Predicted RBP	13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	RARRES1	P49788	294 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	NLRP12	P59046	1061 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	MFSD14C	Q5VZR4	134 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	SASS6	Q6UVJ0	657 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	C1orf186	Q6ZWK4	172 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	ANO5	Q75V66	913 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	GPBP1	Q86WP2	473 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	PLPP6	Q8IY26	295 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	PPTC7	Q8NI37	304 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	DDX12P	Q92771	950 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	SPATA33	Q96N06	139 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	RUSC1	Q9BVN2	902 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	ZNF302	Q9NR11	478 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394		Q9Y3F1	56 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	LOXHD1	Q8IVV2	1947 aa		13.54	□□□□□ -0.24
MATR3-231	ENST00000502394	PVALEF	A0A1B0GWK0	134 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	FSD2	A1L4K1	749 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	RHOBTB3	O94955	611 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	YWHAB	P31946	246 aa	Known RBP	13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	PRMT2	P55345	433 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	PRKCE	Q02156	737 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	TNFAIP2	Q03169	654 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	TRIM32	Q13049	653 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	DHX8	Q14562	1220 aa	Known RBP	13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	STX1A	Q16623	288 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	ARSI	Q5FYB1	569 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	MAP3K21	Q5TCX8	1036 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	RINT1	Q6NUQ1	792 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	UNC13D	Q70J99	1090 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	PLPPR4	Q7Z2D5	763 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	HS3ST6	Q96QI5	342 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	CEP89	Q96ST8	783 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	TSPY26P	Q9H489	355 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	ANO10	Q9NW15	660 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	KCND2	Q9NZV8	630 aa		13.53	□□□□□ -0.24
MATR3-231	ENST00000502394	BIN1	O00499	593 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	BACH1	O14867	736 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	GUCY2C	P25092	1073 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	STAT5B	P51692	787 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	ASIC1	P78348	528 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	NKX3-2	P78367	333 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	CACNB2	Q08289	660 aa	Predicted RBP	13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	GIT2	Q14161	759 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	DPCR1	Q3MIW9	517 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	KMT5B	Q4FZB7	885 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	XKR3	Q5GH77	459 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	FAM160B1	Q5W0V3	765 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	OR6J1	Q8NGC5	347 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	PXYLP1	Q8TE99	480 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	AFG1L	Q8WV93	481 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.52	□□□□□ -0.25	1e-6	■■□□□ 12.9
MATR3-231	ENST00000502394	FAM184B	Q9ULE4	1060 aa		13.52	□□□□□ -0.25
MATR3-231	ENST00000502394	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	ARHGEF35	A5YM69	484 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	TMEM150B	A6NC51	233 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394		A6NJR5	290 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	NOP56	O00567	594 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	ADCY3	O60266	1144 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	HMGCR	P04035	888 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	OAT	P04181	439 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	LGALS2	P05162	132 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	SSB	P05455	408 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	MMP3	P08254	477 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	AKR1A1	P14550	325 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	SLC26A2	P50443	739 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	ZNF131	P52739	623 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	MAPK7	Q13164	816 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	ARHGEF6	Q15052	776 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	TARBP2	Q15633	366 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	COBLL1	Q53SF7	1204 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	DYM	Q7RTS9	669 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	LENG1	Q96BZ8	264 aa	Predicted RBP	13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	REEP2	Q9BRK0	252 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	NIFK	Q9BYG3	293 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	PDLIM7	Q9NR12	457 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	RMND1	Q9NWS8	449 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	TSKS	Q9UJT2	592 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	PCDHA2	Q9Y5H9	948 aa		13.51	□□□□□ -0.25
MATR3-231	ENST00000502394	SEPT4	O43236	478 aa		13.5	□□□□□ -0.25
MATR3-231	ENST00000502394	DUSP11	O75319	330 aa	Known RBP	13.5	□□□□□ -0.25
MATR3-231	ENST00000502394	PPFIA4	O75335	1185 aa		13.5	□□□□□ -0.25
MATR3-231	ENST00000502394	ELN	P15502	786 aa		13.5	□□□□□ -0.25
MATR3-231	ENST00000502394	NPEPPS	P55786	919 aa		13.5	□□□□□ -0.25
MATR3-231	ENST00000502394	COASY	Q13057	564 aa		13.5	□□□□□ -0.25
MATR3-231	ENST00000502394	MFSD10	Q14728	455 aa		13.5	□□□□□ -0.25
MATR3-231	ENST00000502394	PLCB4	Q15147	1175 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms