RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 OTUD6AQ7L8S5 288 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 TMEM199Q8N511 208 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 PCDH10Q9P2E7 1040 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 LOXHD1Q8IVV2 1947 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 TMEM150BA6NC51 233 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 MED24O75448 989 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 IQCF3P0C7M6 154 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.38
CPNE1-228ENST00000498814 DDIT3P35638 169 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 THPOP40225 353 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 NASPP49321 788 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-228ENST00000498814 CCL23P55773 120 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
CPNE1-228ENST00000498814 FPGSQ05932 587 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 SLC39A14Q15043 492 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 ZNF618Q5T7W0 954 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 LRRC8DQ7L1W4 858 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 ZBTB10Q96DT7 871 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 CEP89Q96ST8 783 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 CYP26B1Q9NR63 512 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 PPME1Q9Y570 386 aa17.41■□□□□ 0.38
CPNE1-228ENST00000498814 PARNO95453 639 aaKnown RBP17.4■□□□□ 0.38
CPNE1-228ENST00000498814 BMP8BP34820 402 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 RFC2P35250 354 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 CCT6AP40227 531 aaKnown RBP17.4■□□□□ 0.38
CPNE1-228ENST00000498814 PPIGQ13427 754 aaKnown RBP eCLIP17.4■□□□□ 0.382e-13■■□□□ 11.7
CPNE1-228ENST00000498814 MTERF2Q49AM1 385 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 FAM26DQ5JW98 314 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 KRT79Q5XKE5 535 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 TRAF7Q6Q0C0 670 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 RSPH3Q86UC2 560 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 NME8Q8N427 588 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 DNAJB3Q8WWF6 145 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 AK8Q96MA6 479 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 NACC1Q96RE7 527 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 ANKEF1Q9NU02 776 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 DAXXQ9UER7 740 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-228ENST00000498814 TCHHQ07283 1943 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 SIP14410 1827 aa17.4■□□□□ 0.38
CPNE1-228ENST00000498814 PP2D1A8MPX8 630 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 RSPH10B2B2RC85 870 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 ZBTB39O15060 712 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 RSPH10BP0C881 870 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 CSF2RAP15509 400 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 LONP1P36776 959 aaKnown RBP17.39■□□□□ 0.37
CPNE1-228ENST00000498814 NPEPPSP55786 919 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 NUCB2P80303 420 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 TBC1D8BQ0IIM8 1120 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 XKR9Q5GH70 373 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 PLA2G4FQ68DD2 849 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 KIAA0319LQ8IZA0 1049 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 LINC00301Q8NCQ3 95 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 SNX29Q8TEQ0 813 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 SCLYQ96I15 445 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 CEP170P1Q96L14 293 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 MMTAG2Q9BU76 263 aaKnown RBP17.39■□□□□ 0.37
CPNE1-228ENST00000498814 PRO3102Q9H379 93 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 TFIP11Q9UBB9 837 aaKnown RBP17.39■□□□□ 0.37
CPNE1-228ENST00000498814 FBXO2Q9UK22 296 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-228ENST00000498814 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
CPNE1-228ENST00000498814 TET1Q8NFU7 2136 aa17.39■□□□□ 0.37
CPNE1-228ENST00000498814 IGKV6-21A0A0C4DH24 114 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 SLC26A4O43511 780 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 MAFO75444 373 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-228ENST00000498814 YEATS4O95619 227 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-228ENST00000498814 CDC25AP30304 524 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 STK38Q15208 465 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 ECM1Q16610 540 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 EFCAB12Q6NXP0 572 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 EXOC8Q8IYI6 725 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 RPUSD2Q8IZ73 545 aaKnown RBP17.38■□□□□ 0.37
CPNE1-228ENST00000498814 METTL13Q8N6R0 699 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 LINC01465Q8N7H1 131 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 ZNF579Q8NAF0 562 aaKnown RBP17.38■□□□□ 0.37
CPNE1-228ENST00000498814 PIGOQ8TEQ8 1089 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 JPH2Q9BR39 696 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-228ENST00000498814 SH2D3AQ9BRG2 576 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 FAM49AQ9H0Q0 323 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-228ENST00000498814 IL23AQ9NPF7 189 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 DBR1Q9UK59 544 aaKnown RBP17.38■□□□□ 0.37
CPNE1-228ENST00000498814 CFAP45Q9UL16 551 aa17.38■□□□□ 0.37
CPNE1-228ENST00000498814 TMOD1P28289 359 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 RFC5P40937 340 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 MRPS6P82932 125 aaKnown RBP17.37■□□□□ 0.37
CPNE1-228ENST00000498814 DNM1Q05193 864 aaKnown RBP17.37■□□□□ 0.37
CPNE1-228ENST00000498814 GRIN1Q05586 938 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 MGAT3Q09327 533 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 FOXD4L6Q3SYB3 417 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-228ENST00000498814 HYIQ5T013 277 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 IER5Q5VY09 327 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 POTEGQ6S5H5 508 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 FOXD4L3Q6VB84 417 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-228ENST00000498814 CHRDL2Q6WN34 429 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 KCTD17Q8N5Z5 321 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 UBE2OQ9C0C9 1292 aaKnown RBP17.37■□□□□ 0.37
CPNE1-228ENST00000498814 DHX33Q9H6R0 707 aaKnown RBP17.37■□□□□ 0.37
CPNE1-228ENST00000498814 KIAA1024Q9UPX6 916 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 ATP6V1DQ9Y5K8 247 aa17.37■□□□□ 0.37
CPNE1-228ENST00000498814 SPTLC2O15270 562 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms