RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 SHHQ15465 462 aa18.77■□□□□ 0.6
PRKCB-210ENST00000498739 ZNF365Q70YC5 407 aa18.77■□□□□ 0.6
PRKCB-210ENST00000498739 RPAINQ86UA6 219 aa18.77■□□□□ 0.6
PRKCB-210ENST00000498739 METTL13Q8N6R0 699 aa18.77■□□□□ 0.6
PRKCB-210ENST00000498739 FTOQ9C0B1 505 aaKnown RBP eCLIP18.77■□□□□ 0.65e-6■■■□□ 14.7
PRKCB-210ENST00000498739 LRWD1Q9UFC0 647 aa18.77■□□□□ 0.6
PRKCB-210ENST00000498739 MYH9P35579 1960 aaKnown RBP18.76■□□□□ 0.59
PRKCB-210ENST00000498739 A0A1W2PPC1 479 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 MAGEB2O15479 319 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 BMP15O95972 392 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 FGBP02675 491 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 RPLP2P05387 115 aaKnown RBP18.76■□□□□ 0.59
PRKCB-210ENST00000498739 PFKMP08237 780 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 ZSCAN22P10073 491 aaPredicted RBP18.76■□□□□ 0.59
PRKCB-210ENST00000498739 TMEM62Q0P6H9 643 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 TARBP2Q15633 366 aaKnown RBP18.76■□□□□ 0.59
PRKCB-210ENST00000498739 IL17AQ16552 155 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 TMEM240Q5SV17 173 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 HAUS3Q68CZ6 603 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 OTUD6AQ7L8S5 288 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 IGSF22Q8N9C0 903 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 CEP170P1Q96L14 293 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 TUFT1Q9NNX1 390 aa18.76■□□□□ 0.59
PRKCB-210ENST00000498739 WDR81Q562E7 1941 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 VWA3AA6NCI4 1184 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 M0QZ92 97 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 ZBTB39O15060 712 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 NBNO60934 754 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 MED24O75448 989 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 LYPLA2O95372 231 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 SPATA31C1P0DKV0 1188 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 CLCN3P51790 818 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 NPEPPSP55786 919 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 MRPS6P82932 125 aaKnown RBP18.75■□□□□ 0.59
PRKCB-210ENST00000498739 CEBPZQ03701 1054 aaKnown RBP18.75■□□□□ 0.59
PRKCB-210ENST00000498739 PKP1Q13835 747 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 PDIA5Q14554 519 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 MBTPS1Q14703 1052 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 GPNMBQ14956 572 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 FAM26DQ5JW98 314 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 IER5Q5VY09 327 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 ARL6IP4Q66PJ3 421 aaKnown RBP18.75■□□□□ 0.59
PRKCB-210ENST00000498739 EFCAB12Q6NXP0 572 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 CATSPER3Q86XQ3 398 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 LRRC71Q8N4P6 559 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 VWCEQ96DN2 955 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 RNPC3Q96LT9 517 aaKnown RBP18.75■□□□□ 0.59
PRKCB-210ENST00000498739 POLR3CQ9BUI4 534 aaPredicted RBP18.75■□□□□ 0.59
PRKCB-210ENST00000498739 SUGCTQ9HAC7 445 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 CYP26B1Q9NR63 512 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 CLIC4Q9Y696 253 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 CDY2AQ9Y6F7 541 aa18.75■□□□□ 0.59
PRKCB-210ENST00000498739 KAT6AQ92794 2004 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 RBAK-RBAKDNI3L0D1 243 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 F13A1P00488 732 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 CHRNA1P02708 482 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 TMOD1P28289 359 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 CCT6AP40227 531 aaKnown RBP18.74■□□□□ 0.59
PRKCB-210ENST00000498739 MGAT3Q09327 533 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 XKR9Q5GH70 373 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 OTOP2Q7RTS6 562 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 KIAA0319LQ8IZA0 1049 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 NME8Q8N427 588 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 ZNF579Q8NAF0 562 aaKnown RBP18.74■□□□□ 0.59
PRKCB-210ENST00000498739 SNX29Q8TEQ0 813 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 CCDC43Q96MW1 224 aaKnown RBP18.74■□□□□ 0.59
PRKCB-210ENST00000498739 CEP89Q96ST8 783 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 TRPV2Q9Y5S1 764 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 STK24Q9Y6E0 443 aa18.74■□□□□ 0.59
PRKCB-210ENST00000498739 SCN5AQ14524 2016 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 PP2D1A8MPX8 630 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 CXCL10P02778 98 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 VTNP04004 478 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 ACTN1P12814 892 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 RPA1P27694 616 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 HABP4Q5JVS0 413 aaKnown RBP18.73■□□□□ 0.59
PRKCB-210ENST00000498739 POTEGQ6S5H5 508 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 LINC01465Q8N7H1 131 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 PIGOQ8TEQ8 1089 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 USP28Q96RU2 1077 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 MAP7D2Q96T17 732 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 PPP1R16BQ96T49 567 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 BMP2KQ9NSY1 1161 aaPredicted RBP18.73■□□□□ 0.59
PRKCB-210ENST00000498739 AKT3Q9Y243 479 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 GINS2Q9Y248 185 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 PPME1Q9Y570 386 aa18.73■□□□□ 0.59
PRKCB-210ENST00000498739 A0A087WWV3 80 aa18.72■□□□□ 0.59
PRKCB-210ENST00000498739 ZBBXA8MT70 800 aa18.72■□□□□ 0.59
PRKCB-210ENST00000498739 MAFO75444 373 aaPredicted RBP18.72■□□□□ 0.59
PRKCB-210ENST00000498739 GHRP10912 638 aa18.72■□□□□ 0.59
PRKCB-210ENST00000498739 CDC25AP30304 524 aa18.72■□□□□ 0.59
PRKCB-210ENST00000498739 POLGP54098 1239 aaPredicted RBP18.72■□□□□ 0.59
PRKCB-210ENST00000498739 FOXD4L6Q3SYB3 417 aaPredicted RBP18.72■□□□□ 0.59
PRKCB-210ENST00000498739 KRT79Q5XKE5 535 aa18.72■□□□□ 0.59
PRKCB-210ENST00000498739 CNKSR3Q6P9H4 555 aa18.72■□□□□ 0.59
PRKCB-210ENST00000498739 FOXD4L3Q6VB84 417 aaPredicted RBP18.72■□□□□ 0.59
PRKCB-210ENST00000498739 SLC7A3Q8WY07 619 aa18.72■□□□□ 0.59
PRKCB-210ENST00000498739 HERVK_113Q902F9 699 aa18.72■□□□□ 0.59
PRKCB-210ENST00000498739 ZNF396Q96N95 335 aaPredicted RBP18.72■□□□□ 0.59
PRKCB-210ENST00000498739 JPH2Q9BR39 696 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms