RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 POMKQ9H5K3 350 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 AZI2Q9H6S1 392 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 SORCS3Q9UPU3 1222 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 NOC2LQ9Y3T9 749 aaKnown RBP10.46□□□□□ -0.73
CCDC171-209ENST00000498725 NR2E1Q9Y466 385 aa10.46□□□□□ -0.73
CCDC171-209ENST00000498725 hCG_1642624A0A1W2PR95 340 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 PROB1E7EW31 1015 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 FSCN2O14926 492 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 ID4P47928 161 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 MTMR3Q13615 1198 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 KANK3Q6NY19 840 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 XRRA1Q6P2D8 792 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 MTHFD1LQ6UB35 978 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 TRMT1LQ7Z2T5 733 aaKnown RBP10.45□□□□□ -0.74
CCDC171-209ENST00000498725 TMC7Q7Z402 723 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 CATIPQ7Z7H3 387 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 RALYLQ86SE5 291 aaKnown RBP10.45□□□□□ -0.74
CCDC171-209ENST00000498725 PLEKHM2Q8IWE5 1019 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 ADSSL1Q8N142 457 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 FLCNQ8NFG4 579 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 NKD2Q969F2 451 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-209ENST00000498725 CDHR1Q96JP9 859 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 CWH43Q9H720 699 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 ERVK-5Q9HDB9 667 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 SLC9A2Q9UBY0 812 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 SEC63Q9UGP8 760 aaKnown RBP10.45□□□□□ -0.74
CCDC171-209ENST00000498725 PCDHA2Q9Y5H9 948 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 TAF6LQ9Y6J9 622 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 SQORQ9Y6N5 450 aa10.45□□□□□ -0.74
CCDC171-209ENST00000498725 MYH9P35579 1960 aaKnown RBP10.45□□□□□ -0.74
CCDC171-209ENST00000498725 SMIM35A0A1B0GVV1 85 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 DDX39AO00148 427 aaKnown RBP10.44□□□□□ -0.74
CCDC171-209ENST00000498725 HIP1O00291 1037 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 LAG3P18627 525 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 KLRC1P26715 233 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 NBL1P41271 181 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 TROAPQ12815 778 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 RARS2Q5T160 578 aaKnown RBP10.44□□□□□ -0.74
CCDC171-209ENST00000498725 ASTLQ6HA08 431 aaPredicted RBP10.44□□□□□ -0.74
CCDC171-209ENST00000498725 CES5AQ6NT32 575 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 RAB11FIP4Q86YS3 637 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 C12orf76Q8N812 135 aaPredicted RBP10.44□□□□□ -0.74
CCDC171-209ENST00000498725 RNF169Q8NCN4 708 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 TMEM40Q8WWA1 233 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 MRPS27Q92552 414 aaKnown RBP10.44□□□□□ -0.74
CCDC171-209ENST00000498725 PGBD1Q96JS3 809 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 PSTPIP2Q9H939 334 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 ATP6V0A4Q9HBG4 840 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 JPH1Q9HDC5 661 aaPredicted RBP10.44□□□□□ -0.74
CCDC171-209ENST00000498725 LIMD1Q9UGP4 676 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 PUF60Q9UHX1 559 aaKnown RBP10.44□□□□□ -0.74
CCDC171-209ENST00000498725 ST3GAL5Q9UNP4 418 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 UBIAD1Q9Y5Z9 338 aa10.44□□□□□ -0.74
CCDC171-209ENST00000498725 SPTBN4Q9H254 2564 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 FSD2A1L4K1 749 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 SPDYE3A6NKU9 549 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 C9IYK1 514 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 PIK3CDO00329 1044 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 PLEKHA8P1O95397 391 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 RPLP2P05387 115 aaKnown RBP10.43□□□□□ -0.74
CCDC171-209ENST00000498725 ARP10275 920 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 RXRAP19793 462 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 PDE4AP27815 886 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 STAT5BP51692 787 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 ACTR2P61160 394 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 HDAC1Q13547 482 aaPredicted RBP10.43□□□□□ -0.74
CCDC171-209ENST00000498725 KCNC3Q14003 757 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 SART3Q15020 963 aaKnown RBP10.43□□□□□ -0.74
CCDC171-209ENST00000498725 KIZQ2M2Z5 673 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 TPRNQ4KMQ1 711 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 PDE12Q6L8Q7 609 aaKnown RBP10.43□□□□□ -0.74
CCDC171-209ENST00000498725 KCNT2Q6UVM3 1135 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 SLC24A5Q71RS6 500 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 CHD1LQ86WJ1 897 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 UBALD2Q8IYN6 164 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 CTCFLQ8NI51 663 aaPredicted RBP10.43□□□□□ -0.74
CCDC171-209ENST00000498725 ZNF558Q96NG5 402 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 OSMRQ99650 979 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 SDF4Q9BRK5 362 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 JADE2Q9NQC1 790 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 RGS18Q9NS28 235 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 PCDHA6Q9UN73 950 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 PCDHA8Q9Y5H6 950 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 C2orf16Q68DN1 1984 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 WDR81Q562E7 1941 aa10.43□□□□□ -0.74
CCDC171-209ENST00000498725 DENND4AQ7Z401 1863 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 KDM3AQ9Y4C1 1321 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 NT5C1B-RDH14C9J2C7 533 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 E7EWF7 191 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 BACH1O14867 736 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 VTNP04004 478 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 CYP21A2P08686 494 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 HOXB8P17481 243 aaPredicted RBP10.42□□□□□ -0.74
CCDC171-209ENST00000498725 NUBP1P53384 320 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 PTH1RQ03431 593 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 KRT17Q04695 432 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 TMEM184AQ6ZMB5 413 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 NFXL1Q6ZNB6 911 aa10.42□□□□□ -0.74
CCDC171-209ENST00000498725 LRRC55Q6ZSA7 311 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms