RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 BMP2KQ9NSY1 1161 aaPredicted RBP19.58■□□□□ 0.72
CTDSP1-215ENST00000498160 C17orf102A2RUQ5 167 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 KINO60870 393 aaKnown RBP19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 SLFN14P0C7P3 912 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 SMIM10L2AP0DMW4 78 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 SMIM10L2BP0DMW5 78 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 ATP4AP20648 1035 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 RARRES1P49788 294 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 COL13A1Q5TAT6 717 aaPredicted RBP19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 C1orf53Q5VUE5 145 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 ANO5Q75V66 913 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 NECAB2Q7Z6G3 386 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 ZNF710Q8N1W2 664 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 PDILTQ8N807 584 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 SYT2Q8N9I0 419 aaPredicted RBP19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 SLC7A3Q8WY07 619 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 ABHD8Q96I13 439 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 TNMDQ9H2S6 317 aa19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 WRAP73Q9P2S5 460 aaPredicted RBP19.57■□□□□ 0.72
CTDSP1-215ENST00000498160 STBD1O95210 358 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 COL6A1P12109 1028 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 INSRRP14616 1297 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 NDUFA8P51970 172 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 IRX5P78411 483 aaPredicted RBP19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 TBC1D8BQ0IIM8 1120 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 TARBP2Q15633 366 aaKnown RBP19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 GRIK4Q16099 956 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 E2F4Q16254 413 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 ECM1Q16610 540 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 NBPF20Q3BBV1 942 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 ELOA2Q8IYF1 753 aaPredicted RBP19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 SLC43A3Q8NBI5 491 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 MCPH1Q8NEM0 835 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 PIGOQ8TEQ8 1089 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 DHX58Q96C10 678 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 BHMT2Q9H2M3 363 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 RNPEPQ9H4A4 650 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 C11orf49Q9H6J7 331 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 GTF2IRD1Q9UHL9 959 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 KCNG1Q9UIX4 513 aa19.56■□□□□ 0.72
CTDSP1-215ENST00000498160 E9PMD0 336 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 ARVCFO00192 962 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 ZNF202O95125 648 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 PLA2G4BP0C869 781 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 TMOD1P28289 359 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 HOXC8P31273 242 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 DNM2P50570 870 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 POLGP54098 1239 aaPredicted RBP19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 MTERF2Q49AM1 385 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 TAF2Q6P1X5 1199 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 TNS4Q8IZW8 715 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 FMR1NBQ8N0W7 255 aaPredicted RBP19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 CNNM3Q8NE01 707 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 TCP11Q8WWU5 503 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 KAT6AQ92794 2004 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 ATP6V0A4Q9HBG4 840 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 BLOC1S4Q9NUP1 217 aa19.55■□□□□ 0.72
CTDSP1-215ENST00000498160 TLR3O15455 904 aaKnown RBP19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 GADD45BO75293 160 aaPredicted RBP19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 MAFO75444 373 aaPredicted RBP19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 CDC42EP1Q00587 391 aa19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 NAALADL2Q58DX5 795 aa19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 FAM47CQ5HY64 1035 aa19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 PADI6Q6TGC4 694 aa19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 ENGASEQ8NFI3 743 aa19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 PLIN2Q99541 437 aa19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 SENP6Q9GZR1 1112 aaPredicted RBP19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 GOLPH3LQ9H4A5 285 aa19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 DHX33Q9H6R0 707 aaKnown RBP19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 KBTBD4Q9NVX7 518 aa19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 HDAC6Q9UBN7 1215 aa19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 TUBE1Q9UJT0 475 aa19.54■□□□□ 0.72
CTDSP1-215ENST00000498160 ARID2Q68CP9 1835 aa19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 A0A087X0B3 334 aa19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 MBLAC1A4D2B0 266 aaPredicted RBP19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 SSBP05455 408 aaKnown RBP eCLIP19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 GUCY2CP25092 1073 aa19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 MNX1P50219 401 aaPredicted RBP19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 SLC12A3P55017 1021 aa19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 CHMP4BP1P59074 171 aa19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 PSMC6P62333 389 aa19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 SKOR2Q2VWA4 1001 aaPredicted RBP19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 KRBA2Q6ZNG9 492 aa19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 LMBR1Q8WVP7 490 aa19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 MTRQ99707 1265 aa19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 ODF2LQ9ULJ1 636 aa19.53■□□□□ 0.72
CTDSP1-215ENST00000498160 ACTN4O43707 911 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 KRT18P05783 430 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 CYP11B2P19099 503 aa19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 SNW1Q13573 536 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 MCM6Q14566 821 aa19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 EMC2Q15006 297 aa19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 SNX17Q15036 470 aa19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 PLA2G4FQ68DD2 849 aa19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 CNNM4Q6P4Q7 775 aa19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 MTHFD1LQ6UB35 978 aa19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 TRMT1LQ7Z2T5 733 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 KCNK18Q7Z418 384 aa19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 RSPH3Q86UC2 560 aa19.52■□□□□ 0.72
CTDSP1-215ENST00000498160 GPBP1Q86WP2 473 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms