RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 AATFQ9NY61 560 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS45-210ENST00000497638 TBX21Q9UL17 535 aa9.25□□□□□ -0.93
VPS45-210ENST00000497638 PALD1Q9ULE6 856 aa9.25□□□□□ -0.93
VPS45-210ENST00000497638 PA2G4Q9UQ80 394 aaKnown RBP9.25□□□□□ -0.93
VPS45-210ENST00000497638 HDAC5Q9UQL6 1122 aa9.25□□□□□ -0.93
VPS45-210ENST00000497638 MROH7Q68CQ1 1323 aa9.25□□□□□ -0.93
VPS45-210ENST00000497638 A0A0G2JMZ2 1700 aa9.25□□□□□ -0.93
VPS45-210ENST00000497638 XIRP2A4UGR9 3374 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 ERCC3P19447 782 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 AP3B2Q13367 1082 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 PRAMEF19Q5SWL8 479 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 NAA16Q6N069 864 aaPredicted RBP9.24□□□□□ -0.93
VPS45-210ENST00000497638 PI16Q6UXB8 463 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 MB21D1Q8N884 522 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 NUP133Q8WUM0 1156 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 HERVK_113Q902F9 699 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 CCDC74AQ96AQ1 378 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 MAML3Q96JK9 1138 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 CITED4Q96RK1 184 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 NIF3L1Q9GZT8 377 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 MTIF3Q9H2K0 278 aaKnown RBP9.24□□□□□ -0.93
VPS45-210ENST00000497638 MROH8Q9H579 483 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 RPAP3Q9H6T3 665 aaPredicted RBP9.24□□□□□ -0.93
VPS45-210ENST00000497638 STARD7Q9NQZ5 370 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 HOXC10Q9NYD6 342 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 LRP2BPQ9P2M1 347 aa9.24□□□□□ -0.93
VPS45-210ENST00000497638 ZC3H7BQ9UGR2 993 aaKnown RBP9.24□□□□□ -0.93
VPS45-210ENST00000497638 PRRC2BQ5JSZ5 2229 aaKnown RBP9.24□□□□□ -0.93
VPS45-210ENST00000497638 GRXCR1A8MXD5 290 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 EIF1AYO14602 144 aaKnown RBP9.23□□□□□ -0.93
VPS45-210ENST00000497638 ERC2O15083 957 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 IGSF3O75054 1194 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 PGK1P00558 417 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 COG2Q14746 738 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 RAB3GAP1Q15042 981 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 GORABQ5T7V8 394 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 TATDN1Q6P1N9 297 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 C16orf59Q7L2K0 433 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 TMEM199Q8N511 208 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 EPHX3Q9H6B9 360 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 SLC28A3Q9HAS3 691 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 ZNF521Q96K83 1311 aa9.23□□□□□ -0.93
VPS45-210ENST00000497638 REV3LO60673 3130 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 UQCRFS1P1P0C7P4 283 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 FCER1AP12319 257 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 AKR1A1P14550 325 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 KCNQ1P51787 676 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 ACLYP53396 1101 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 TFF2Q03403 129 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 TFCP2Q12800 502 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 ABCB5Q2M3G0 1257 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 CCDC184Q52MB2 194 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 ZNF365Q70YC5 407 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 AGBL5Q8NDL9 886 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 ACER1Q8TDN7 264 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 NEUROD6Q96NK8 337 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 DNAJC25Q9H1X3 360 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 NKX2-4Q9H2Z4 354 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 GSX1Q9H4S2 264 aaPredicted RBP9.22□□□□□ -0.93
VPS45-210ENST00000497638 ABCB6Q9NP58 842 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 CABP5Q9NP86 173 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 SAP30BPQ9UHR5 308 aaKnown RBP9.22□□□□□ -0.93
VPS45-210ENST00000497638 SERPINB13Q9UIV8 391 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 PPP1R9AQ9ULJ8 1098 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 MYH1P12882 1939 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 TRANK1O15050 2925 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 BRWD1Q9NSI6 2320 aa9.22□□□□□ -0.93
VPS45-210ENST00000497638 ZNFX1Q9P2E3 1918 aaKnown RBP9.21□□□□□ -0.93
VPS45-210ENST00000497638 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 CSF2RAP15509 400 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 LIG1P18858 919 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 MCAMP43121 646 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 CERKLQ49MI3 558 aaPredicted RBP9.21□□□□□ -0.94
VPS45-210ENST00000497638 CERS3Q8IU89 383 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 TINF2Q9BSI4 451 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 TANGO6Q9C0B7 1094 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 C1GALT1Q9NS00 363 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 COG5Q9UP83 839 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 DIS3Q9Y2L1 958 aaKnown RBP9.21□□□□□ -0.94
VPS45-210ENST00000497638 ELP1O95163 1332 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 GBF1Q92538 1859 aa9.21□□□□□ -0.94
VPS45-210ENST00000497638 LRRC37A2A6NM11 1700 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 DYNC1LI2O43237 492 aaPredicted RBP9.2□□□□□ -0.94
VPS45-210ENST00000497638 SLC25A27O95847 323 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 ZNF865P0CJ78 1059 aaPredicted RBP9.2□□□□□ -0.94
VPS45-210ENST00000497638 ACRP10323 421 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 PLS1Q14651 629 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 RPS26P11Q5JNZ5 115 aaPredicted RBP9.2□□□□□ -0.94
VPS45-210ENST00000497638 OGFOD3Q6PK18 319 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 NFXL1Q6ZNB6 911 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 ADGRA1Q86SQ6 560 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 TTC6Q86TZ1 520 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 KLHDC9Q8NEP7 349 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 SSH1Q8WYL5 1049 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 SNX27Q96L92 541 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 GLT1D1Q96MS3 346 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 PIDD1Q9HB75 910 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 IL23AQ9NPF7 189 aa9.2□□□□□ -0.94
VPS45-210ENST00000497638 CNPY2Q9Y2B0 182 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms