RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 LRRC37A2A6NM11 1700 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 VWA5AO00534 786 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 CASP1P29466 404 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 CDC25BP30305 580 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 CCL23P55773 120 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 NKX3-2P78367 333 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 TMEM119Q4V9L6 283 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 HYIQ5T013 277 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 ENOX1Q8TC92 643 aaKnown RBP22.06■■□□□ 1.12
ACTN4-208ENST00000497637 LRRC15Q8TF66 581 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 STAMQ92783 540 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 C7orf25Q9BPX7 421 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 NOC4LQ9BVI4 516 aaKnown RBP22.06■■□□□ 1.12
ACTN4-208ENST00000497637 RAVER2Q9HCJ3 691 aaKnown RBP22.06■■□□□ 1.12
ACTN4-208ENST00000497637 CTDP1Q9Y5B0 961 aaPredicted RBP22.06■■□□□ 1.12
ACTN4-208ENST00000497637 MYH7BA7E2Y1 1941 aa22.06■■□□□ 1.12
ACTN4-208ENST00000497637 KCNB1Q14721 858 aa22.05■■□□□ 1.12
ACTN4-208ENST00000497637 PRR16Q569H4 304 aa22.05■■□□□ 1.12
ACTN4-208ENST00000497637 GJD3Q8N144 294 aa22.05■■□□□ 1.12
ACTN4-208ENST00000497637 PLIN2Q99541 437 aa22.05■■□□□ 1.12
ACTN4-208ENST00000497637 BLZF1Q9H2G9 400 aa22.05■■□□□ 1.12
ACTN4-208ENST00000497637 CD320Q9NPF0 282 aa22.05■■□□□ 1.12
ACTN4-208ENST00000497637 STK24Q9Y6E0 443 aa22.05■■□□□ 1.12
ACTN4-208ENST00000497637 FAM86B1E9PN63 330 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 RPN1P04843 607 aaKnown RBP22.04■■□□□ 1.12
ACTN4-208ENST00000497637 PTMAP06454 111 aaKnown RBP22.04■■□□□ 1.12
ACTN4-208ENST00000497637 FAM86B2P0C5J1 330 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 ZNF76P36508 570 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 OAZ1P54368 228 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 AMPD3Q01432 767 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 CCDC144BQ3MJ40 725 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 REPS2Q8NFH8 660 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 PHOSPHO2Q8TCD6 241 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 SNX29Q8TEQ0 813 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 ARNTL2Q8WYA1 636 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 MRFAP1L1Q96HT8 127 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 LMCD1Q9NZU5 365 aa22.04■■□□□ 1.12
ACTN4-208ENST00000497637 ZNF214Q9UL59 606 aaPredicted RBP22.04■■□□□ 1.12
ACTN4-208ENST00000497637 POTEMA6NI47 508 aa22.03■■□□□ 1.12
ACTN4-208ENST00000497637 CPXCR1Q8N123 301 aa22.03■■□□□ 1.12
ACTN4-208ENST00000497637 CDK5RAP3Q96JB5 506 aa22.03■■□□□ 1.12
ACTN4-208ENST00000497637 SLC9A7Q96T83 725 aa22.03■■□□□ 1.12
ACTN4-208ENST00000497637 CERS4Q9HA82 394 aa22.03■■□□□ 1.12
ACTN4-208ENST00000497637 BLOC1S4Q9NUP1 217 aa22.03■■□□□ 1.12
ACTN4-208ENST00000497637 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.03■■□□□ 1.12
ACTN4-208ENST00000497637 UMODL1Q5DID0 1318 aa22.03■■□□□ 1.12
ACTN4-208ENST00000497637 BRWD1Q9NSI6 2320 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 DNAJC25-GNG10A0A024R161 153 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 IGLV3-22A0A075B6J6 115 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 PPP1R3GB7ZBB8 358 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 MSH4O15457 936 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 KLRC4O43908 158 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 ACTN1P12814 892 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 ALAS1P13196 640 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 ITGA7Q13683 1181 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 ZNF658Q5TYW1 1059 aaPredicted RBP22.02■■□□□ 1.12
ACTN4-208ENST00000497637 SV2BQ7L1I2 683 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 TEX13BQ9BXU2 312 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 GTPBP4Q9BZE4 634 aaKnown RBP22.02■■□□□ 1.12
ACTN4-208ENST00000497637 MAF1Q9H063 256 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 WNT8AQ9H1J5 351 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 HSD3B7Q9H2F3 369 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 GBF1Q92538 1859 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 KDM3AQ9Y4C1 1321 aa22.02■■□□□ 1.12
ACTN4-208ENST00000497637 EPOPA6NHQ4 379 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 GOLGA6L6A8MZA4 724 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 ZEB2O60315 1214 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 TPM3P06753 285 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 IRX5P78411 483 aaPredicted RBP22.01■■□□□ 1.11
ACTN4-208ENST00000497637 TAP1Q03518 808 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 CNNM4Q6P4Q7 775 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 FAM178BQ8IXR5 827 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 RAD54LQ92698 747 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 GJA10Q969M2 543 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 CCDC47Q96A33 483 aaKnown RBP22.01■■□□□ 1.11
ACTN4-208ENST00000497637 FBXL18Q96ME1 805 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 LRRC27Q9C0I9 530 aa22.01■■□□□ 1.11
ACTN4-208ENST00000497637 NFIBO00712 420 aa22■■□□□ 1.11
ACTN4-208ENST00000497637 ATP2A1O14983 1001 aa22■■□□□ 1.11
ACTN4-208ENST00000497637 RHOBTB3O94955 611 aa22■■□□□ 1.11
ACTN4-208ENST00000497637 CD44P16070 742 aaKnown RBP22■■□□□ 1.11
ACTN4-208ENST00000497637 SSTR3P32745 418 aaPredicted RBP22■■□□□ 1.11
ACTN4-208ENST00000497637 CCT6AP40227 531 aaKnown RBP22■■□□□ 1.11
ACTN4-208ENST00000497637 SPIRE1Q08AE8 756 aa22■■□□□ 1.11
ACTN4-208ENST00000497637 TKFCQ3LXA3 575 aa22■■□□□ 1.11
ACTN4-208ENST00000497637 MUM1L1Q5H9M0 696 aa22■■□□□ 1.11
ACTN4-208ENST00000497637 CXCL17Q6UXB2 119 aa22■■□□□ 1.11
ACTN4-208ENST00000497637 SYTL5Q8TDW5 730 aaPredicted RBP22■■□□□ 1.11
ACTN4-208ENST00000497637 TRERF1Q96PN7 1200 aa22■■□□□ 1.11
ACTN4-208ENST00000497637 TRIM9Q9C026 710 aa22■■□□□ 1.11
ACTN4-208ENST00000497637 NT5C3AQ9H0P0 336 aa22■■□□□ 1.11
ACTN4-208ENST00000497637 MEIS1O00470 390 aa21.99■■□□□ 1.11
ACTN4-208ENST00000497637 ADCY6O43306 1168 aa21.99■■□□□ 1.11
ACTN4-208ENST00000497637 TTLL4Q14679 1199 aa21.99■■□□□ 1.11
ACTN4-208ENST00000497637 KMT5BQ4FZB7 885 aa21.99■■□□□ 1.11
ACTN4-208ENST00000497637 CEP55Q53EZ4 464 aa21.99■■□□□ 1.11
ACTN4-208ENST00000497637 NIPA1Q7RTP0 329 aa21.99■■□□□ 1.11
ACTN4-208ENST00000497637 ZSCAN30Q86W11 494 aa21.99■■□□□ 1.11
ACTN4-208ENST00000497637 ERMNQ8TAM6 284 aa21.99■■□□□ 1.11
ACTN4-208ENST00000497637 CYP2W1Q8TAV3 490 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms