RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	NFS1	Q9Y697	457 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	FLOT1	O75955	427 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	GH1	P01241	217 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PUM3	Q15397	648 aa	Known RBP	11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SCYL3	Q8IZE3	742 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	UCMA	Q8WVF2	138 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	DCAF5	Q96JK2	942 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RMDN2	Q96LZ7	410 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TNR	Q92752	1358 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	NRXN3	Q9Y4C0	1643 aa		11.49	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PFDN1	O60925	122 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	USP11	P51784	963 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	EIF3B	P55884	814 aa	Known RBP	11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ADAM9	Q13443	819 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CYP4F22	Q6NT55	531 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	FITM2	Q8N6M3	262 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	LRRC15	Q8TF66	581 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SYT15	Q9BQS2	421 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CUEDC2	Q9H467	287 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MCM9	Q9NXL9	1143 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	DCTN4	Q9UJW0	460 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597		A0A1W2PQJ5	194 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CALM1	P0DP23	149 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CALM2	P0DP24	149 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CALM3	P0DP25	149 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	KCNA3	P22001	575 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	EPHB2	P29323	1055 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PRPH	P41219	470 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	DEUP1	Q05D60	604 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	KRT79	Q5XKE5	535 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CWF19L1	Q69YN2	538 aa	Known RBP	11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	DNAJC10	Q8IXB1	793 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	LRRC8C	Q8TDW0	803 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	STMN4	Q9H169	189 aa	Predicted RBP	11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TAOK3	Q9H2K8	898 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CTTNBP2NL	Q9P2B4	639 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PCDHGC5	Q9Y5F6	944 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CACNA1F	O60840	1977 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ITSN1	Q15811	1721 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TMEM2	Q9UHN6	1383 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	C5orf60	A6NFR6	353 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	LRRN2	O75325	713 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CBX6	O95503	412 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	GSTA1	P08263	222 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PYGB	P11216	843 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	GNAT2	P19087	354 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TFAP4	Q01664	338 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ICA1	Q05084	483 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TROAP	Q12815	778 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PDCD2	Q16342	344 aa	Predicted RBP	11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TMEM266	Q2M3C6	531 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PPFIBP2	Q8ND30	876 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	LARP4B	Q92615	738 aa	Known RBP	11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	DDX12P	Q92771	950 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	STMN2	Q93045	179 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	C18orf8	Q96DM3	657 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	EPAS1	Q99814	870 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CEP72	Q9P209	647 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ARL2BP	Q9Y2Y0	163 aa		11.48	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SSU72P8	A0A1W2PR75	194 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	DNAJC3	Q13217	504 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ITIH4	Q14624	930 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SEPT2	Q15019	361 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	FAM26F	Q5R3K3	315 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	C6orf118	Q5T5N4	469 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ZNF662	Q6ZS27	426 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ARHGAP22	Q7Z5H3	698 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TRIM74	Q86UV6	250 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TRIM73	Q86UV7	250 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	VPS52	Q8N1B4	723 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MCUR1	Q96AQ8	359 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RNF25	Q96BH1	459 aa	Predicted RBP	11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	KBTBD4	Q9NVX7	518 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	PCDHA4	Q9UN74	947 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CCDC188	H7C350	402 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	AHCYL1	O43865	530 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TRAPPC10	P48553	1259 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	FKBP3	Q00688	224 aa	Known RBP	11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ZNF268	Q14587	947 aa	Predicted RBP	11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	MESD	Q14696	234 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	HGSNAT	Q68CP4	663 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ANO7	Q6IWH7	933 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	GLYCTK	Q8IVS8	523 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RDH13	Q8NBN7	331 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SUPT20H	Q8NEM7	779 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RPGR	Q92834	1020 aa	Known RBP	11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	RGL1	Q9NZL6	768 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SLC12A4	Q9UP95	1085 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	SPATA31A3	Q5VYP0	1347 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CNTNAP5	Q8WYK1	1306 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	POC1B-GALNT4	F8VUJ3	575 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	TXNDC9	O14530	226 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	CLIC2	O15247	247 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ECEL1	O95672	775 aa		11.47	□□□□□ -0.57
TRAPPC12-223	ENST00000497597	ECHS1	P30084	290 aa		11.47	□□□□□ -0.57

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