RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 RHDQ02161 417 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PAK1Q13153 545 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 TCIRG1Q13488 830 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 TTLL4Q14679 1199 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 ODF1Q14990 250 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 LAPTM4AQ15012 233 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PCBP2Q15366 365 aaKnown RBP eCLIP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 TERF2Q15554 542 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SMAD2Q15796 467 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 KIZQ2M2Z5 673 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 ABCB5Q2M3G0 1257 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SKOR2Q2VWA4 1001 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 LRIT3Q3SXY7 679 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 IQSEC1Q6DN90 963 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PPP4R4Q6NUP7 873 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 HHIPL2Q6UWX4 724 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 KSR2Q6VAB6 950 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 KIAA1211Q6ZU35 1233 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM214BQ7L5A3 538 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 WAPLQ7Z5K2 1190 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PNMA8AQ86V59 439 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 FBXO11Q86XK2 927 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 KRT78Q8N1N4 520 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 VWA5B2Q8N398 1253 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PRR18Q8N4B5 295 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 FIBCD1Q8N539 461 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZNF610Q8N9Z0 462 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 C2CD4AQ8NCU7 369 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 MAFAQ8NHW3 353 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SLC5A5Q92911 643 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 TIFAQ96CG3 184 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 CLIP3Q96DZ5 547 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM193BQ96PV7 902 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SMAD5Q99717 465 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 MCMBPQ9BTE3 642 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 USP26Q9BXU7 913 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PRDM14Q9GZV8 571 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 MKRN2Q9H000 416 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 RNF208Q9H0X6 261 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 TMEM60Q9H2L4 133 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 CYP4F12Q9HCS2 524 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PTPRHQ9HD43 1115 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 JPH1Q9HDC5 661 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 VTA1Q9NP79 307 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 CABP5Q9NP86 173 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SPTLC3Q9NUV7 552 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 IP6K2Q9UHH9 426 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 GGA1Q9UJY5 639 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 RCAN3Q9UKA8 241 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 HDAC9Q9UKV0 1011 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PCOLCE2Q9UKZ9 415 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 NOB1Q9ULX3 412 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PHTF1Q9UMS5 762 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 TRAF6Q9Y4K3 522 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 PCDHA9Q9Y5H5 950 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 SPO11Q9Y5K1 396 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 CPDO75976 1380 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 USP54Q70EL1 1684 aa3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 MAP1BP46821 2468 aaKnown RBP3.07□□□□□ -1.92
CKS1BP2-201ENST00000497342 WDR87Q6ZQQ6 2873 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 TRBV23OR9-2A0A075B6M9 112 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 BLACEA4D250 179 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZNF561-AS1K7EIQ3 104 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 APAF1O14727 1248 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 GSTA4O15217 222 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 SLITRK5O94991 958 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 INSRP06213 1382 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 THBDP07204 575 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM163BP0C2L3 166 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 ITGB8P26012 769 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 BMP8BP34820 402 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 SCN4AP35499 1836 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 KIR3DL1P43629 444 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 MTNR1BP49286 362 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 CLTCL1P53675 1640 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 POU4F1Q01851 419 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 NHLH1Q02575 133 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 SRSF11Q05519 484 aaKnown RBP3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 HSF5Q4G112 596 aaPredicted RBP3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 GPRASP1Q5JY77 1395 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 DACT2Q5SW24 774 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 WASHC2AQ641Q2 1341 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 ANKRD34AQ69YU3 496 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM109BQ6ICB4 259 aaPredicted RBP3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 LETMD1Q6P1Q0 360 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 TXNDC11Q6PKC3 985 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 SLC4A10Q6U841 1118 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 IGF2-ASQ6U949 168 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 KCNT2Q6UVM3 1135 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 TOM1L2Q6ZVM7 507 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 CDC37L1Q7L3B6 337 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 ADAT2Q7Z6V5 191 aaKnown RBP3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 C11orf74Q86VG3 221 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 LURAP1LQ8IV03 231 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 TIAM2Q8IVF5 1701 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 CCDC103Q8IW40 242 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 SMYD4Q8IYR2 804 aaPredicted RBP3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 IFNL2Q8IZJ0 200 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 SYNE4Q8N205 404 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms