RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 TEFQ10587 303 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 SLC9A5Q14940 896 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 C9orf131Q5VYM1 1079 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 ZKSCAN2Q63HK3 967 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 VHLLQ6RSH7 139 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 ATF7IPQ6VMQ6 1270 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 GGNQ86UU5 652 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 UNC5CLQ8IV45 518 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 CARFQ8N187 725 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 PLEKHO2Q8TD55 490 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 SPATA6Q9NWH7 488 aaPredicted RBP6.77□□□□□ -1.33
GGPS1-208ENST00000497327 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.77□□□□□ -1.33
GGPS1-208ENST00000497327 NOB1Q9ULX3 412 aaKnown RBP6.77□□□□□ -1.33
GGPS1-208ENST00000497327 EMC9Q9Y3B6 208 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 SIT1Q9Y3P8 196 aa6.77□□□□□ -1.33
GGPS1-208ENST00000497327 TRBV23OR9-2A0A075B6M9 112 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 ANKRD34BA5PLL1 514 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 ERVV-2B6SEH9 535 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 NOBOXO60393 691 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 ADRB1P08588 477 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 VPS72Q15906 364 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 PPP2R5EQ16537 467 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 DBX2Q6ZNG2 339 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 DPF3Q92784 378 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 FRAT1Q92837 279 aaPredicted RBP6.76□□□□□ -1.33
GGPS1-208ENST00000497327 CLEC1BQ9P126 229 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 USP35Q9P2H5 1018 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 NUDT5Q9UKK9 219 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 AKT3Q9Y243 479 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 SUGT1Q9Y2Z0 365 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 DUSP10Q9Y6W6 482 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 NRAPQ86VF7 1730 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 KIF16BQ96L93 1317 aa6.76□□□□□ -1.33
GGPS1-208ENST00000497327 TCERG1O14776 1098 aaKnown RBP6.75□□□□□ -1.33
GGPS1-208ENST00000497327 IPO8O15397 1037 aaKnown RBP6.75□□□□□ -1.33
GGPS1-208ENST00000497327 NPHS1O60500 1241 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 ZBTB7AO95365 584 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 NTRK1P04629 796 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 C8BP07358 591 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 PLS3P13797 630 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 PLP2Q04941 152 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 SCRN1Q12765 414 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 ZNF790Q6PG37 636 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 MMP19Q99542 508 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 RGS12O14924 1447 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 ABCC4O15439 1325 aa6.75□□□□□ -1.33
GGPS1-208ENST00000497327 PARP4Q9UKK3 1724 aaKnown RBP6.74□□□□□ -1.33
GGPS1-208ENST00000497327 EXOC5O00471 708 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 KCNH1O95259 989 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 FUCA1P04066 466 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 SLC39A6Q13433 755 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 MVPQ14764 893 aaKnown RBP6.74□□□□□ -1.33
GGPS1-208ENST00000497327 SPATS1Q496A3 300 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 CCDC30Q5VVM6 783 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 G2E3Q7L622 706 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 FERMT3Q86UX7 667 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 LINC00482Q8N8I6 264 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 SEC16BQ96JE7 1060 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 MRGPRX3Q96LB0 322 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 C8orf37Q96NL8 207 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 GPRC5CQ9NQ84 441 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 USP40Q9NVE5 1235 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
GGPS1-208ENST00000497327 TNS2Q63HR2 1409 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 PLCH1Q4KWH8 1693 aa6.74□□□□□ -1.33
GGPS1-208ENST00000497327 SHANK3Q9BYB0 1731 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 NWD2Q9ULI1 1742 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 SIPA1L3O60292 1781 aaPredicted RBP6.73□□□□□ -1.33
GGPS1-208ENST00000497327 KDM3BQ7LBC6 1761 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 CANXP27824 592 aaKnown RBP6.73□□□□□ -1.33
GGPS1-208ENST00000497327 INF2Q27J81 1249 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 GTF2IRD2BQ6EKJ0 949 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 GTF2IRD2Q86UP8 949 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 TRIM59Q8IWR1 403 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 TMEM57Q8N5G2 664 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 BVESQ8NE79 360 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 NPLOC4Q8TAT6 608 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 MRRFQ96E11 262 aaKnown RBP6.73□□□□□ -1.33
GGPS1-208ENST00000497327 ZNF496Q96IT1 587 aaPredicted RBP6.73□□□□□ -1.33
GGPS1-208ENST00000497327 SYT3Q9BQG1 590 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 LGR4Q9BXB1 951 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 API5Q9BZZ5 524 aaKnown RBP6.73□□□□□ -1.33
GGPS1-208ENST00000497327 LNPKQ9C0E8 428 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 PTPRCP08575 1304 aa6.73□□□□□ -1.33
GGPS1-208ENST00000497327 SCN11AQ9UI33 1791 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 PRAMEF22A3QJZ6 481 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 THBDP07204 575 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 ZNF143P52747 638 aaPredicted RBP6.72□□□□□ -1.33
GGPS1-208ENST00000497327 UBXN11Q5T124 520 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 LRP10Q7Z4F1 713 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 ZNF761Q86XN6 746 aaPredicted RBP6.72□□□□□ -1.33
GGPS1-208ENST00000497327 USP33Q8TEY7 942 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 FRS2Q8WU20 508 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 CPLX3Q8WVH0 158 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 PIGBQ92521 554 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 DDX11Q96FC9 970 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 APBA2Q99767 749 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 GORASP1Q9BQQ3 440 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 CHMP4AQ9BY43 222 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 ACBD3Q9H3P7 528 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms