RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 CHCHD6Q9BRQ6 235 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 WDR18Q9BV38 432 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 LSM14BQ9BX40 385 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 STK31Q9BXU1 1019 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 C22orf23Q9BZE7 217 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ZDHHC5Q9C0B5 715 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 LACRTQ9GZZ8 138 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 NUCKS1Q9H1E3 243 aaKnown RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 NUP62CLQ9H1M0 184 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 CERS4Q9HA82 394 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ATP6V0A4Q9HBG4 840 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 UBN1Q9NPG3 1134 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 DCP1AQ9NPI6 582 aaPredicted RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 WASH6PQ9NQA3 447 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 ITM2CQ9NQX7 267 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 VPS45Q9NRW7 570 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 GPR27Q9NS67 375 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 SMC4Q9NTJ3 1288 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 PRR13Q9NZ81 148 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.26□□□□□ -2.05
UBR4-217ENST00000497018 TMEFF2Q9UIK5 374 aaPredicted RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 GDF2Q9UK05 429 aaPredicted RBP2.26□□□□□ -2.05
UBR4-217ENST00000497018 ACAD8Q9UKU7 415 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 PADI4Q9UM07 663 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 TTLL3Q9Y4R7 772 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 SPO11Q9Y5K1 396 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 GPR45Q9Y5Y3 372 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 SLC4A7Q9Y6M7 1214 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 NRKQ7Z2Y5 1582 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 MAGI2Q86UL8 1455 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 RALGAPBQ86X10 1494 aa2.26□□□□□ -2.05
UBR4-217ENST00000497018 NPATQ14207 1427 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 MYOM1P52179 1685 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ABCA9Q8IUA7 1624 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 BIVM-ERCC5R4GMW8 1640 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 CCDC66A2RUB6 948 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 KRBA1A5PL33 1030 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 CAPN8A6NHC0 703 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 GOLGA8AA7E2F4 631 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 GOLGA8BA8MQT2 603 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ZNF561-AS1K7EIQ3 104 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 EIF3FO00303 357 aaPredicted RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 ADAMTS3O15072 1205 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 TMPRSS2O15393 492 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 DHX16O60231 1041 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 KDM1AO60341 852 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 NDUFS2O75306 463 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 CYP11A1P05108 521 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ZNF865P0CJ78 1059 aaPredicted RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 HNRNPLP14866 589 aaKnown RBP eCLIP2.25□□□□□ -2.05
UBR4-217ENST00000497018 PDCP20941 246 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ENPP1P22413 925 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 EDNRBP24530 442 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 MAOBP27338 520 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 HTR1BP28222 390 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 SMARCA1P28370 1054 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 UBA7P41226 1012 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 KCNJ6P48051 423 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 HSPA7P48741 367 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 MAN2A2P49641 1150 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ARL4DP49703 201 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 CLK1P49759 484 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 CACNB3P54284 484 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 DCAF7P61962 342 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ETF1P62495 437 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 LACTBP83111 547 aaPredicted RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 SRSF2Q01130 221 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 ALDH6A1Q02252 535 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 GSTM4Q03013 218 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 SCRN1Q12765 414 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 FOXO1Q12778 655 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 PAK1Q13153 545 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 SNW1Q13573 536 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 PMS2P11Q13670 270 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ACAP2Q15057 778 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 POSTNQ15063 836 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 GRIK5Q16478 980 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 MEA1Q16626 185 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ARHGAP44Q17R89 818 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 CLEC16AQ2KHT3 1053 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 MPEG1Q2M385 716 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 TBC1D10BQ4KMP7 808 aaPredicted RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 CCDC38Q502W7 563 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 FAM209BQ5JX69 171 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 PRAMEF13Q5VWM6 474 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 FAAH2Q6GMR7 532 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 GPAT2Q6NUI2 795 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ESRP1Q6NXG1 681 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 FAM117BQ6P1L5 589 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 PLBD1Q6P4A8 553 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 RFX8Q6ZV50 586 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 LRRTM4Q86VH4 590 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 HID1Q8IV36 788 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ZC3H7AQ8IWR0 971 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 COLGALT2Q8IYK4 626 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 MIER2Q8N344 545 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 FIBCD1Q8N539 461 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 CISD2Q8N5K1 135 aaKnown RBP2.25□□□□□ -2.05
UBR4-217ENST00000497018 TGFBRAP1Q8WUH2 860 aa2.25□□□□□ -2.05
UBR4-217ENST00000497018 ASB12Q8WXK4 309 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms