RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 DEFB118Q96PH6 123 aa20.36■□□□□ 0.85
RGP1-202ENST00000496906 SH2D3AQ9BRG2 576 aa20.36■□□□□ 0.85
RGP1-202ENST00000496906 MCOLN1Q9GZU1 580 aa20.36■□□□□ 0.85
RGP1-202ENST00000496906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.35■□□□□ 0.85
RGP1-202ENST00000496906 ARHGEF35A5YM69 484 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 HAS3O00219 553 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 HBP1O60381 514 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 NPEPPSP55786 919 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 POSTNQ15063 836 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 KCNA10Q16322 511 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 XKR9Q5GH70 373 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 PCSK9Q8NBP7 692 aaKnown RBP20.35■□□□□ 0.85
RGP1-202ENST00000496906 SYAP1Q96A49 352 aaPredicted RBP20.35■□□□□ 0.85
RGP1-202ENST00000496906 CEP170P1Q96L14 293 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 CCDC43Q96MW1 224 aaKnown RBP20.35■□□□□ 0.85
RGP1-202ENST00000496906 KATNAL1Q9BW62 490 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 CYP26B1Q9NR63 512 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 TRPC6Q9Y210 931 aa20.35■□□□□ 0.85
RGP1-202ENST00000496906 MYMKA6NI61 221 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 MYCNP04198 464 aaPredicted RBP20.34■□□□□ 0.85
RGP1-202ENST00000496906 ASGR1P07306 291 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 PRR29P0C7W0 189 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 CYP11B2P19099 503 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 AMPD3Q01432 767 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 MFSD10Q14728 455 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 TARBP2Q15633 366 aaKnown RBP20.34■□□□□ 0.85
RGP1-202ENST00000496906 COL13A1Q5TAT6 717 aaPredicted RBP20.34■□□□□ 0.85
RGP1-202ENST00000496906 RINT1Q6NUQ1 792 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 CXCL17Q6UXB2 119 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 GPBP1Q86WP2 473 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 CEP89Q96ST8 783 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 MTG1Q9BT17 334 aaPredicted RBP20.34■□□□□ 0.85
RGP1-202ENST00000496906 RUSC1Q9BVN2 902 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 TRIM9Q9C026 710 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 HOOK1Q9UJC3 728 aaKnown RBP20.34■□□□□ 0.85
RGP1-202ENST00000496906 LOXHD1Q8IVV2 1947 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 ZBTB42B2RXF5 422 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 GTPBP6O43824 516 aaPredicted RBP20.34■□□□□ 0.85
RGP1-202ENST00000496906 MYL1P05976 194 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 PSEN2P49810 448 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 PNOCQ13519 176 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 KIAA0753Q2KHM9 967 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 MTERF2Q49AM1 385 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 ARSHQ5FYA8 562 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 PADI6Q6TGC4 694 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 C1orf186Q6ZWK4 172 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 ARRDC4Q8NCT1 418 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 C7orf25Q9BPX7 421 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 TSEN34Q9BSV6 310 aaKnown RBP20.34■□□□□ 0.85
RGP1-202ENST00000496906 LRRC27Q9C0I9 530 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 OGDHLQ9ULD0 1010 aa20.34■□□□□ 0.85
RGP1-202ENST00000496906 MOXD2PA6NHM9 499 aa20.33■□□□□ 0.84
RGP1-202ENST00000496906 CASP1P29466 404 aa20.33■□□□□ 0.84
RGP1-202ENST00000496906 CUL4BQ13620 913 aa20.33■□□□□ 0.84
RGP1-202ENST00000496906 CNNM4Q6P4Q7 775 aa20.33■□□□□ 0.84
RGP1-202ENST00000496906 DDX12PQ92771 950 aa20.33■□□□□ 0.84
RGP1-202ENST00000496906 BLZF1Q9H2G9 400 aa20.33■□□□□ 0.84
RGP1-202ENST00000496906 KCND2Q9NZV8 630 aa20.33■□□□□ 0.84
RGP1-202ENST00000496906 PPME1Q9Y570 386 aa20.33■□□□□ 0.84
RGP1-202ENST00000496906 USO1O60763 962 aaKnown RBP20.32■□□□□ 0.84
RGP1-202ENST00000496906 GJB1P08034 283 aa20.32■□□□□ 0.84
RGP1-202ENST00000496906 INSRRP14616 1297 aa20.32■□□□□ 0.84
RGP1-202ENST00000496906 DPYDQ12882 1025 aa20.32■□□□□ 0.84
RGP1-202ENST00000496906 RBM43Q6ZSC3 357 aaKnown RBP20.32■□□□□ 0.84
RGP1-202ENST00000496906 ERCC4Q92889 916 aaPredicted RBP20.32■□□□□ 0.84
RGP1-202ENST00000496906 ARID2Q68CP9 1835 aa20.31■□□□□ 0.84
RGP1-202ENST00000496906 SCN10AQ9Y5Y9 1956 aa20.31■□□□□ 0.84
RGP1-202ENST00000496906 COL1A2P08123 1366 aa20.31■□□□□ 0.84
RGP1-202ENST00000496906 DGAT1O75907 488 aa20.31■□□□□ 0.84
RGP1-202ENST00000496906 ACLYP53396 1101 aa20.31■□□□□ 0.84
RGP1-202ENST00000496906 ZNF484Q5JVG2 852 aa20.31■□□□□ 0.84
RGP1-202ENST00000496906 DYMQ7RTS9 669 aa20.31■□□□□ 0.84
RGP1-202ENST00000496906 U2AF1L4Q8WU68 220 aaKnown RBP20.31■□□□□ 0.84
RGP1-202ENST00000496906 DNAJC19Q96DA6 116 aa20.31■□□□□ 0.84
RGP1-202ENST00000496906 CRISPLD2Q9H0B8 497 aa20.31■□□□□ 0.84
RGP1-202ENST00000496906 DHX33Q9H6R0 707 aaKnown RBP20.31■□□□□ 0.84
RGP1-202ENST00000496906 BMP2KQ9NSY1 1161 aaPredicted RBP20.31■□□□□ 0.84
RGP1-202ENST00000496906 NPHP3-ACAD11A0A0J9YXS1 232 aa20.3■□□□□ 0.84
RGP1-202ENST00000496906 DNM1LO00429 736 aa20.3■□□□□ 0.84
RGP1-202ENST00000496906 CABYRO75952 493 aa20.3■□□□□ 0.84
RGP1-202ENST00000496906 SGPL1O95470 568 aa20.3■□□□□ 0.84
RGP1-202ENST00000496906 SMIM10L2AP0DMW4 78 aa20.3■□□□□ 0.84
RGP1-202ENST00000496906 SMIM10L2BP0DMW5 78 aa20.3■□□□□ 0.84
RGP1-202ENST00000496906 GUCY2CP25092 1073 aa20.3■□□□□ 0.84
RGP1-202ENST00000496906 PPFIA1Q13136 1202 aa20.3■□□□□ 0.84
RGP1-202ENST00000496906 SPATA20Q8TB22 786 aa20.3■□□□□ 0.84
RGP1-202ENST00000496906 PDLIM7Q9NR12 457 aa20.3■□□□□ 0.84
RGP1-202ENST00000496906 KBTBD13C9JR72 458 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 RFC5P40937 340 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 POLGP54098 1239 aaPredicted RBP20.29■□□□□ 0.84
RGP1-202ENST00000496906 CHMP4BP1P59074 171 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 ASIC1P78348 528 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 RAD51AP2Q09MP3 1159 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 GIT2Q14161 759 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 GRIK4Q16099 956 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 TRAPPC12Q8WVT3 735 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 REEP2Q9BRK0 252 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 XPNPEP1Q9NQW7 623 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 KIAA1468Q9P260 1216 aa20.29■□□□□ 0.84
RGP1-202ENST00000496906 PHF24Q9UPV7 400 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms