RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 NECAB2Q7Z6G3 386 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 SESTD1Q86VW0 696 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 CEP170P1Q96L14 293 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 CUEDC2Q9H467 287 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 GOLPH3LQ9H4A5 285 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 C11orf49Q9H6J7 331 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 CYP26B1Q9NR63 512 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 HDAC6Q9UBN7 1215 aa24.27■■□□□ 1.48
C9orf3-222ENST00000496567 LOXHD1Q8IVV2 1947 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 A0A087WWV3 80 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 MCM4P33991 863 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 RARRES1P49788 294 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 GRIK4Q16099 956 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 FAM47CQ5HY64 1035 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 PLA2G4FQ68DD2 849 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 KCNK18Q7Z418 384 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 DIS3LQ8TF46 1054 aaKnown RBP24.26■■□□□ 1.47
C9orf3-222ENST00000496567 RAD54LQ92698 747 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 PAWRQ96IZ0 340 aaKnown RBP24.26■■□□□ 1.47
C9orf3-222ENST00000496567 BHMT2Q9H2M3 363 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 USP25Q9UHP3 1055 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 GRIN2DO15399 1336 aa24.26■■□□□ 1.47
C9orf3-222ENST00000496567 C17orf102A2RUQ5 167 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 ARHGEF35A5YM69 484 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 TMEM150BA6NC51 233 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 TARBP2Q15633 366 aaKnown RBP24.25■■□□□ 1.47
C9orf3-222ENST00000496567 MTERF2Q49AM1 385 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 EXOC8Q8IYI6 725 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 SLC43A3Q8NBI5 491 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 LARP4BQ92615 738 aaKnown RBP24.25■■□□□ 1.47
C9orf3-222ENST00000496567 DHX58Q96C10 678 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 BLOC1S4Q9NUP1 217 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 GTF2IRD1Q9UHL9 959 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 ARVCFO00192 962 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 NPEPPSP55786 919 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 FAM160A1Q05DH4 1040 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 E2F4Q16254 413 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 NAALADL2Q58DX5 795 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 MAGEF1Q9HAY2 307 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 SETD4Q9NVD3 440 aa24.25■■□□□ 1.47
C9orf3-222ENST00000496567 CCDC85CA6NKD9 419 aa24.24■■□□□ 1.47
C9orf3-222ENST00000496567 ZBTB42B2RXF5 422 aa24.24■■□□□ 1.47
C9orf3-222ENST00000496567 PLA2G4BP0C869 781 aa24.24■■□□□ 1.47
C9orf3-222ENST00000496567 IGBP1P78318 339 aa24.24■■□□□ 1.47
C9orf3-222ENST00000496567 TBC1D8BQ0IIM8 1120 aa24.24■■□□□ 1.47
C9orf3-222ENST00000496567 CEP57L1Q8IYX8 460 aa24.24■■□□□ 1.47
C9orf3-222ENST00000496567 SYT2Q8N9I0 419 aaPredicted RBP24.24■■□□□ 1.47
C9orf3-222ENST00000496567 SH2D3AQ9BRG2 576 aa24.24■■□□□ 1.47
C9orf3-222ENST00000496567 KAT6AQ92794 2004 aa24.24■■□□□ 1.47
C9orf3-222ENST00000496567 ZNF202O95125 648 aa24.23■■□□□ 1.47
C9orf3-222ENST00000496567 SSBP05455 408 aaKnown RBP eCLIP24.23■■□□□ 1.47
C9orf3-222ENST00000496567 HOXC8P31273 242 aa24.23■■□□□ 1.47
C9orf3-222ENST00000496567 RFC5P40937 340 aa24.23■■□□□ 1.47
C9orf3-222ENST00000496567 SLC39A5Q6ZMH5 540 aa24.23■■□□□ 1.47
C9orf3-222ENST00000496567 SV2BQ7L1I2 683 aa24.23■■□□□ 1.47
C9orf3-222ENST00000496567 FMR1NBQ8N0W7 255 aaPredicted RBP24.23■■□□□ 1.47
C9orf3-222ENST00000496567 LRRC15Q8TF66 581 aa24.23■■□□□ 1.47
C9orf3-222ENST00000496567 PPP1R13LQ8WUF5 828 aa24.23■■□□□ 1.47
C9orf3-222ENST00000496567 LMBR1Q8WVP7 490 aa24.23■■□□□ 1.47
C9orf3-222ENST00000496567 JPH2Q9BR39 696 aaPredicted RBP24.23■■□□□ 1.47
C9orf3-222ENST00000496567 MROH7Q68CQ1 1323 aa24.23■■□□□ 1.47
C9orf3-222ENST00000496567 MAGEB2O15479 319 aa24.22■■□□□ 1.47
C9orf3-222ENST00000496567 DGAT1O75907 488 aa24.22■■□□□ 1.47
C9orf3-222ENST00000496567 SLFN14P0C7P3 912 aa24.22■■□□□ 1.47
C9orf3-222ENST00000496567 MCM6Q14566 821 aa24.22■■□□□ 1.47
C9orf3-222ENST00000496567 C1orf53Q5VUE5 145 aa24.22■■□□□ 1.47
C9orf3-222ENST00000496567 ENGASEQ8NFI3 743 aa24.22■■□□□ 1.47
C9orf3-222ENST00000496567 TRAPPC12Q8WVT3 735 aa24.22■■□□□ 1.47
C9orf3-222ENST00000496567 SLC7A3Q8WY07 619 aa24.22■■□□□ 1.47
C9orf3-222ENST00000496567 CCDC34Q96HJ3 373 aa24.22■■□□□ 1.47
C9orf3-222ENST00000496567 CEP89Q96ST8 783 aa24.22■■□□□ 1.47
C9orf3-222ENST00000496567 PTMSP20962 102 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 KLRC1P26715 233 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 CDK7P50613 346 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 POLGP54098 1239 aaPredicted RBP24.21■■□□□ 1.47
C9orf3-222ENST00000496567 SLC12A3P55017 1021 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 ADAM17P78536 824 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 PADI6Q6TGC4 694 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 RETREG2Q8NC44 543 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 LRRC27Q9C0I9 530 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 KCND2Q9NZV8 630 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 SERTAD1Q9UHV2 236 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 TUBE1Q9UJT0 475 aa24.21■■□□□ 1.47
C9orf3-222ENST00000496567 MBLAC1A4D2B0 266 aaPredicted RBP24.2■■□□□ 1.47
C9orf3-222ENST00000496567 MAFO75444 373 aaPredicted RBP24.2■■□□□ 1.47
C9orf3-222ENST00000496567 LIG1P18858 919 aa24.2■■□□□ 1.47
C9orf3-222ENST00000496567 ATN1P54259 1190 aaPredicted RBP24.2■■□□□ 1.47
C9orf3-222ENST00000496567 SNW1Q13573 536 aaKnown RBP24.2■■□□□ 1.47
C9orf3-222ENST00000496567 DHX8Q14562 1220 aaKnown RBP24.2■■□□□ 1.47
C9orf3-222ENST00000496567 MARCH8Q5T0T0 291 aa24.2■■□□□ 1.47
C9orf3-222ENST00000496567 GDF6Q6KF10 455 aaPredicted RBP24.2■■□□□ 1.47
C9orf3-222ENST00000496567 MTHFD1LQ6UB35 978 aa24.2■■□□□ 1.47
C9orf3-222ENST00000496567 UBE2Q1Q7Z7E8 422 aa24.2■■□□□ 1.47
C9orf3-222ENST00000496567 TNMDQ9H2S6 317 aa24.2■■□□□ 1.47
C9orf3-222ENST00000496567 DHX33Q9H6R0 707 aaKnown RBP24.2■■□□□ 1.47
C9orf3-222ENST00000496567 ARID2Q68CP9 1835 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 ACTN4O43707 911 aaKnown RBP24.2■■□□□ 1.46
C9orf3-222ENST00000496567 GAS2O43903 313 aaKnown RBP24.2■■□□□ 1.46
C9orf3-222ENST00000496567 NR1I2O75469 434 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 C22orf31O95567 290 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms