RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 IREB2P48200 963 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 PMS1P54277 932 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 BACE1P56817 501 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 TUBB4BP68371 445 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 KRT76Q01546 638 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 CYP4A11Q02928 519 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 KCNC4Q03721 635 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 EHHADHQ08426 723 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 SPIRE1Q08AE8 756 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 MTMR1Q13613 665 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 HSP90AA2PQ14568 343 aaPredicted RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 GNPTABQ3T906 1256 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 NOL9Q5SY16 702 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 ARHGEF16Q5VV41 709 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 SYT10Q6XYQ8 523 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 HS2ST1Q7LGA3 356 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 SAMD7Q7Z3H4 446 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 KIAA1328Q86T90 577 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 TPH2Q8IWU9 490 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 CCDC170Q8IYT3 715 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 RDH13Q8NBN7 331 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 RDM1Q8NG50 284 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 LENG9Q96B70 501 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 DCPSQ96C86 337 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 DNAJC19Q96DA6 116 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 TEPSINQ96N21 525 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 TRERF1Q96PN7 1200 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 DUSP9Q99956 384 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 NUDT12Q9BQG2 462 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 EDEM3Q9BZQ6 932 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 BHMT2Q9H2M3 363 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 NDST4Q9H3R1 872 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 DEF6Q9H4E7 631 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 MRPL44Q9H9J2 332 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 RAVER2Q9HCJ3 691 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 OLFML3Q9NRN5 406 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 TYW1Q9NV66 732 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 FBXO28Q9NVF7 368 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 ARGLU1Q9NWB6 273 aaPredicted RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 GPRC5DQ9NZD1 345 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 CGNQ9P2M7 1197 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 PGAP2Q9UHJ9 254 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 DNAI1Q9UI46 699 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 ZNF112Q9UJU3 913 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 VAV3Q9UKW4 847 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 CAPN11Q9UMQ6 739 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 SAMM50Q9Y512 469 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.63□□□□□ -1.19
USP39-219ENST00000496047 GOLGB1Q14789 3259 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 ZSWIM8A7E2V4 1837 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 SHTN1A0MZ66 631 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 SOWAHDA6NJG2 315 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 MEIS1O00470 390 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 PDXKO00764 312 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 OPLAHO14841 1288 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 MAFGO15525 162 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 EDIL3O43854 480 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 COBLO75128 1261 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 P4HBP07237 508 aaKnown RBP7.62□□□□□ -1.19
USP39-219ENST00000496047 INPP5BP32019 993 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 COPB2P35606 906 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 GNG11P61952 73 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 UBXN2AP68543 259 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 SPP2Q13103 211 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 SPA17Q15506 151 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 KNOP1Q1ED39 458 aaKnown RBP7.62□□□□□ -1.19
USP39-219ENST00000496047 KIAA1755Q5JYT7 1200 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 NBPF12Q5TAG4 269 aaPredicted RBP7.62□□□□□ -1.19
USP39-219ENST00000496047 NSMFQ6X4W1 530 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 OTOP1Q7RTM1 612 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 KCNK18Q7Z418 384 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 SFR1Q86XK3 245 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 TMEM139Q8IV31 216 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 LRRC15Q8TF66 581 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 NLRP7Q8WX94 980 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 GPRASP2Q96D09 838 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 DYDC2Q96IM9 177 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 AGBL1Q96MI9 1066 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 IWS1Q96ST2 819 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 DNAJC7Q99615 494 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 REEP2Q9BRK0 252 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 GLIS2Q9BZE0 524 aaPredicted RBP7.62□□□□□ -1.19
USP39-219ENST00000496047 SEMA6BQ9H3T3 888 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 HAUS4Q9H6D7 363 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 ZSWIM4Q9H7M6 989 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 ACAD9Q9H845 621 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 MMRN2Q9H8L6 949 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 PARVGQ9HBI0 331 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 JADE2Q9NQC1 790 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 ADARB2Q9NS39 739 aaKnown RBP7.62□□□□□ -1.19
USP39-219ENST00000496047 HOMER2Q9NSB8 354 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 RNF146Q9NTX7 359 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 HOXC10Q9NYD6 342 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 LARSQ9P2J5 1176 aaKnown RBP7.62□□□□□ -1.19
USP39-219ENST00000496047 FBXO40Q9UH90 709 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 DAAM1Q9Y4D1 1078 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 TRPM7Q96QT4 1865 aa7.62□□□□□ -1.19
USP39-219ENST00000496047 PFASO15067 1338 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 ZNF536O15090 1300 aa7.61□□□□□ -1.19
USP39-219ENST00000496047 CTAGE9A4FU28 777 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms