RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SFNP31947 248 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 TFF2Q03403 129 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 SCRN1Q12765 414 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 NFX1Q12986 1120 aaKnown RBP14.4□□□□□ -0.1
PTPRF-214ENST00000496043 NONOQ15233 471 aaKnown RBP eCLIP14.4□□□□□ -0.1
PTPRF-214ENST00000496043 LRCH2Q5VUJ6 765 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 METTL13Q8N6R0 699 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 SLC5A5Q92911 643 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 TPCN1Q9ULQ1 816 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 GINS2Q9Y248 185 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 RWDD3Q9Y3V2 267 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 CUL9Q8IWT3 2517 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 M0R2N6 131 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 GPR182O15218 404 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 RPS6KA5O75582 802 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 DGKIO75912 1065 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 C22orf31O95567 290 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 TMOD1P28289 359 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 BMPR1AP36894 532 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 JAK3P52333 1124 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 CRYBB1P53674 252 aaPredicted RBP14.39□□□□□ -0.11
PTPRF-214ENST00000496043 BTG3Q14201 252 aaPredicted RBP14.39□□□□□ -0.11
PTPRF-214ENST00000496043 MOXD1Q6UVY6 613 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 KRT25Q7Z3Z0 450 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 ADAMTS19Q8TE59 1207 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 ZNF689Q96CS4 500 aaPredicted RBP14.39□□□□□ -0.11
PTPRF-214ENST00000496043 MRPL38Q96DV4 380 aaKnown RBP14.39□□□□□ -0.11
PTPRF-214ENST00000496043 AIFM3Q96NN9 605 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 CDHR5Q9HBB8 845 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
PTPRF-214ENST00000496043 KCNJ14Q9UNX9 436 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 UNC80Q8N2C7 3258 aa14.39□□□□□ -0.11
PTPRF-214ENST00000496043 MICAL3Q7RTP6 2002 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 PSMD10O75832 226 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 TMEM266Q2M3C6 531 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 EFCAB12Q6NXP0 572 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 MIER3Q7Z3K6 550 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 NPAS4Q8IUM7 802 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 ZNF710Q8N1W2 664 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 RDM1Q8NG50 284 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 WASF1Q92558 559 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 MBOAT7Q96N66 472 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 UHRF1Q96T88 793 aaPredicted RBP14.38□□□□□ -0.11
PTPRF-214ENST00000496043 PHF20Q9BVI0 1012 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 UNC45AQ9H3U1 944 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 ERVK-5Q9HDB9 667 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 LRFN2Q9ULH4 789 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 ST3GAL5Q9UNP4 418 aa14.38□□□□□ -0.11
PTPRF-214ENST00000496043 NOC2LQ9Y3T9 749 aaKnown RBP14.38□□□□□ -0.11
PTPRF-214ENST00000496043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.37□□□□□ -0.11
PTPRF-214ENST00000496043 CCDC194A0A1B0GVG4 234 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 C5orf67F2Z3F1 127 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 CHMP2AO43633 222 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 ZNF862O60290 1169 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 TDP2O95551 362 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 OATP04181 439 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 CENPBP07199 599 aaPredicted RBP14.37□□□□□ -0.11
PTPRF-214ENST00000496043 CTNNB1P35222 781 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 KCNQ1P51787 676 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 AK2P54819 239 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 NPY5RQ15761 445 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 INF2Q27J81 1249 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 KIZQ2M2Z5 673 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 CRIPAKQ8N1N5 446 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 LINC01599Q8WXQ3 324 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 CLP1Q92989 425 aaKnown RBP14.37□□□□□ -0.11
PTPRF-214ENST00000496043 GJA10Q969M2 543 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 TMX1Q9H3N1 280 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 DDX25Q9UHL0 483 aaKnown RBP14.37□□□□□ -0.11
PTPRF-214ENST00000496043 PCDHB7Q9Y5E2 793 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 ADGRA3Q8IWK6 1321 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 STK36Q9NRP7 1315 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 CHD7Q9P2D1 2997 aa14.37□□□□□ -0.11
PTPRF-214ENST00000496043 EYSQ5T1H1 3165 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 PRUNE2Q8WUY3 3088 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 DENND3A2RUS2 1198 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 GPR32O75388 356 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 VTNP04004 478 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 SARSP49591 514 aaKnown RBP14.36□□□□□ -0.11
PTPRF-214ENST00000496043 LETM2Q2VYF4 491 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 XKR3Q5GH77 459 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 SLC24A5Q71RS6 500 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 CMTR2Q8IYT2 770 aaKnown RBP14.36□□□□□ -0.11
PTPRF-214ENST00000496043 BANK1Q8NDB2 785 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 MAP7D2Q96T17 732 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 NAP1L4Q99733 375 aaKnown RBP14.36□□□□□ -0.11
PTPRF-214ENST00000496043 ADAM2Q99965 735 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 C11orf84Q9BUA3 381 aaPredicted RBP14.36□□□□□ -0.11
PTPRF-214ENST00000496043 PLVAPQ9BX97 442 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 LMAN2LQ9H0V9 348 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 RC3H2Q9HBD1 1191 aaKnown RBP14.36□□□□□ -0.11
PTPRF-214ENST00000496043 RGS18Q9NS28 235 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 C1orf112Q9NSG2 853 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 ORC3Q9UBD5 711 aaPredicted RBP14.36□□□□□ -0.11
PTPRF-214ENST00000496043 AKT3Q9Y243 479 aa14.36□□□□□ -0.11
PTPRF-214ENST00000496043 CTDNEP1O95476 244 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 CLCN3P51790 818 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 NEK4P51957 841 aa14.35□□□□□ -0.11
PTPRF-214ENST00000496043 NLRP11P59045 1033 aaKnown RBP14.35□□□□□ -0.11
PTPRF-214ENST00000496043 CDC42EP1Q00587 391 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms