RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 GNAT2P19087 354 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 EIF2AK2P19525 551 aaKnown RBP11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 IBSPP21815 317 aaPredicted RBP11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 APOBRQ0VD83 1088 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 ATAT1Q5SQI0 421 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 KIAA1841Q6NSI8 718 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 TAF2Q6P1X5 1199 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 RHPN1Q8TCX5 695 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 SYTL5Q8TDW5 730 aaPredicted RBP11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 BORCS6Q96GS4 357 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 MLXIPQ9HAP2 919 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 EPB41L4AQ9HCS5 686 aaPredicted RBP11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 NGRNQ9NPE2 291 aaKnown RBP11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 HCSTQ9UBK5 93 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 ZNF215Q9UL58 517 aaPredicted RBP11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 TNNQ9UQP3 1299 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 HCFC2Q9Y5Z7 792 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 TTC3P53804 2025 aa11.21□□□□□ -0.62
SMARCAL1-213ENST00000496037 MYH7BA7E2Y1 1941 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 MYH7P12883 1935 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 KIAA1217Q5T5P2 1943 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 NMT2O60551 498 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 SCG2P13521 617 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 GATMP50440 423 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 FBXO47Q5MNV8 452 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 RARS2Q5T160 578 aaKnown RBP11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 TMEM57Q8N5G2 664 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 LMBR1Q8WVP7 490 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 LINC01599Q8WXQ3 324 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 MRPS27Q92552 414 aaKnown RBP11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 GPR20Q99678 358 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 NACAP1Q9BZK3 213 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 MAF1Q9H063 256 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 TBC1D17Q9HA65 648 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 WNT16Q9UBV4 365 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 LZTS1Q9Y250 596 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 MYO10Q9HD67 2058 aa11.2□□□□□ -0.62
SMARCAL1-213ENST00000496037 FRYQ5TBA9 3013 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 SOBPA7XYQ1 873 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 HIDE1A8MVS5 230 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 DCNP07585 359 aaKnown RBP11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 NR3C2P08235 984 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 CFHP08603 1231 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 ATP5JP18859 108 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 UBA1P22314 1058 aaKnown RBP11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 MGAT3Q09327 533 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 CCDC149Q6ZUS6 474 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 OTOP3Q7RTS5 596 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 MCF2L2Q86YR7 1114 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 WNT2BQ93097 391 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 KIF1BPQ96EK5 621 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 USP26Q9BXU7 913 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 COL20A1Q9P218 1284 aa11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 SMG5Q9UPR3 1016 aaKnown RBP11.19□□□□□ -0.62
SMARCAL1-213ENST00000496037 GPR179Q6PRD1 2367 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 SETXQ7Z333 2677 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 ABCB11O95342 1321 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 NRCAMQ92823 1304 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 TBKBP1A7MCY6 615 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 GPAA1O43292 621 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 LAG3P18627 525 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 CD52P31358 61 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 CA8P35219 290 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 PPARAQ07869 468 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 NONOQ15233 471 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 TMC7Q7Z402 723 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 COLGALT1Q8NBJ5 622 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 NETO1Q8TDF5 533 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 ATRIPQ8WXE1 791 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 APPBP2Q92624 585 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 KCNK12Q9HB15 430 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 PXMP2Q9NR77 195 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 IL17RBQ9NRM6 502 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 DZANK1Q9NVP4 752 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 GMEB2Q9UKD1 530 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 CA14Q9ULX7 337 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 SIT1Q9Y3P8 196 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 CDY2AQ9Y6F7 541 aa11.18□□□□□ -0.62
SMARCAL1-213ENST00000496037 ZZEF1O43149 2961 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 KRBA1A5PL33 1030 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 ANP32CO43423 234 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 NARSO43776 548 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 RANBP6O60518 1105 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 HSPD1P10809 573 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 MYCLP12524 364 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 PLCB3Q01970 1234 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 PAK2Q13177 524 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 SMC1AQ14683 1233 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 CEP85Q6P2H3 762 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 IFNL3Q8IZI9 196 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 TMEM87AQ8NBN3 555 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 NAPBQ9H115 298 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 AGO3Q9H9G7 860 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 NPDC1Q9NQX5 325 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 IGSF9Q9P2J2 1179 aa11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 SEPT9Q9UHD8 586 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 SUPT16HQ9Y5B9 1047 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-213ENST00000496037 PCDHB7Q9Y5E2 793 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms