RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SUGCTQ9HAC7 445 aa27.36■■□□□ 1.97
HLA-C-209ENST00000495835 TTC3P53804 2025 aa27.36■■□□□ 1.97
HLA-C-209ENST00000495835 PRRC2BQ5JSZ5 2229 aaKnown RBP27.36■■□□□ 1.97
HLA-C-209ENST00000495835 CCDC194A0A1B0GVG4 234 aa27.35■■□□□ 1.97
HLA-C-209ENST00000495835 UPP2O95045 317 aa27.35■■□□□ 1.97
HLA-C-209ENST00000495835 CTDNEP1O95476 244 aa27.35■■□□□ 1.97
HLA-C-209ENST00000495835 NEK4P51957 841 aa27.35■■□□□ 1.97
HLA-C-209ENST00000495835 TJAP1Q5JTD0 557 aa27.35■■□□□ 1.97
HLA-C-209ENST00000495835 PPP4R3AQ6IN85 833 aa27.35■■□□□ 1.97
HLA-C-209ENST00000495835 GTF3C6Q969F1 213 aa27.35■■□□□ 1.97
HLA-C-209ENST00000495835 AGO3Q9H9G7 860 aaKnown RBP27.35■■□□□ 1.97
HLA-C-209ENST00000495835 ORC3Q9UBD5 711 aaPredicted RBP27.35■■□□□ 1.97
HLA-C-209ENST00000495835 PADI3Q9ULW8 664 aa27.35■■□□□ 1.97
HLA-C-209ENST00000495835 KCNJ14Q9UNX9 436 aa27.35■■□□□ 1.97
HLA-C-209ENST00000495835 C22orf31O95567 290 aa27.34■■□□□ 1.97
HLA-C-209ENST00000495835 GCFC2P16383 781 aaKnown RBP27.34■■□□□ 1.97
HLA-C-209ENST00000495835 CD52P31358 61 aa27.34■■□□□ 1.97
HLA-C-209ENST00000495835 ME3Q16798 604 aa27.34■■□□□ 1.97
HLA-C-209ENST00000495835 B3GNT9Q6UX72 402 aa27.34■■□□□ 1.97
HLA-C-209ENST00000495835 TDP2O95551 362 aa27.33■■□□□ 1.97
HLA-C-209ENST00000495835 TMEM62Q0P6H9 643 aa27.33■■□□□ 1.97
HLA-C-209ENST00000495835 PAK2Q13177 524 aa27.33■■□□□ 1.97
HLA-C-209ENST00000495835 INF2Q27J81 1249 aa27.33■■□□□ 1.97
HLA-C-209ENST00000495835 SPRED2Q7Z698 418 aa27.33■■□□□ 1.97
HLA-C-209ENST00000495835 NEK8Q86SG6 692 aa27.33■■□□□ 1.97
HLA-C-209ENST00000495835 ETNPPLQ8TBG4 499 aa27.33■■□□□ 1.97
HLA-C-209ENST00000495835 FAM20AQ96MK3 541 aa27.33■■□□□ 1.97
HLA-C-209ENST00000495835 UNC45AQ9H3U1 944 aa27.33■■□□□ 1.97
HLA-C-209ENST00000495835 RNF216Q9NWF9 866 aaPredicted RBP27.33■■□□□ 1.97
HLA-C-209ENST00000495835 DDX25Q9UHL0 483 aaKnown RBP27.33■■□□□ 1.97
HLA-C-209ENST00000495835 COL4A4P53420 1690 aaPredicted RBP27.33■■□□□ 1.97
HLA-C-209ENST00000495835 OATP04181 439 aa27.32■■□□□ 1.96
HLA-C-209ENST00000495835 TMOD1P28289 359 aa27.32■■□□□ 1.96
HLA-C-209ENST00000495835 MRPS5P82675 430 aaKnown RBP27.32■■□□□ 1.96
HLA-C-209ENST00000495835 MICALL1Q8N3F8 863 aa27.32■■□□□ 1.96
HLA-C-209ENST00000495835 FBXO22Q8NEZ5 403 aa27.32■■□□□ 1.96
HLA-C-209ENST00000495835 PRDM6Q9NQX0 595 aa27.32■■□□□ 1.96
HLA-C-209ENST00000495835 COG5Q9UP83 839 aa27.32■■□□□ 1.96
HLA-C-209ENST00000495835 RWDD3Q9Y3V2 267 aa27.32■■□□□ 1.96
HLA-C-209ENST00000495835 RALGAPA2Q2PPJ7 1873 aa27.32■■□□□ 1.96
HLA-C-209ENST00000495835 ZNF862O60290 1169 aa27.31■■□□□ 1.96
HLA-C-209ENST00000495835 CRYBB1P53674 252 aaPredicted RBP27.31■■□□□ 1.96
HLA-C-209ENST00000495835 MIER3Q7Z3K6 550 aa27.31■■□□□ 1.96
HLA-C-209ENST00000495835 ASB2Q96Q27 587 aa27.31■■□□□ 1.96
HLA-C-209ENST00000495835 C17orf80Q9BSJ5 609 aa27.31■■□□□ 1.96
HLA-C-209ENST00000495835 BRMS1Q9HCU9 246 aa27.31■■□□□ 1.96
HLA-C-209ENST00000495835 MTUS1Q9ULD2 1270 aa27.31■■□□□ 1.96
HLA-C-209ENST00000495835 XIRP2A4UGR9 3374 aa27.3■■□□□ 1.96
HLA-C-209ENST00000495835 TBX3O15119 743 aa27.3■■□□□ 1.96
HLA-C-209ENST00000495835 SEC24BO95487 1268 aa27.3■■□□□ 1.96
HLA-C-209ENST00000495835 FDPSP14324 419 aaKnown RBP27.3■■□□□ 1.96
HLA-C-209ENST00000495835 AAK1Q2M2I8 961 aa27.3■■□□□ 1.96
HLA-C-209ENST00000495835 LETM2Q2VYF4 491 aa27.3■■□□□ 1.96
HLA-C-209ENST00000495835 EPC2Q52LR7 807 aa27.3■■□□□ 1.96
HLA-C-209ENST00000495835 RTN4RL1Q86UN2 441 aaPredicted RBP27.3■■□□□ 1.96
HLA-C-209ENST00000495835 CRIPAKQ8N1N5 446 aa27.3■■□□□ 1.96
HLA-C-209ENST00000495835 FIBCD1Q8N539 461 aa27.3■■□□□ 1.96
HLA-C-209ENST00000495835 ZNF689Q96CS4 500 aaPredicted RBP27.3■■□□□ 1.96
HLA-C-209ENST00000495835 RC3H2Q9HBD1 1191 aaKnown RBP27.3■■□□□ 1.96
HLA-C-209ENST00000495835 NLRC5Q86WI3 1866 aa27.3■■□□□ 1.96
HLA-C-209ENST00000495835 GPR182O15218 404 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 CHMP2AO43633 222 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 RPS6KA5O75582 802 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 STAG3L1P0CL83 205 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 PRKCEQ02156 737 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 XKR3Q5GH77 459 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 NPAS4Q8IUM7 802 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 TMEM192Q8IY95 271 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 METTL13Q8N6R0 699 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 NECAB1Q8N987 351 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 GDPD5Q8WTR4 605 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 NIFKQ9BYG3 293 aaKnown RBP27.29■■□□□ 1.96
HLA-C-209ENST00000495835 KCNMB3Q9NPA1 279 aa27.29■■□□□ 1.96
HLA-C-209ENST00000495835 ADGRA3Q8IWK6 1321 aa27.28■■□□□ 1.96
HLA-C-209ENST00000495835 H3BNC9 293 aa27.28■■□□□ 1.96
HLA-C-209ENST00000495835 DGKIO75912 1065 aa27.28■■□□□ 1.96
HLA-C-209ENST00000495835 RB1P06400 928 aa27.28■■□□□ 1.96
HLA-C-209ENST00000495835 EFCAB12Q6NXP0 572 aa27.28■■□□□ 1.96
HLA-C-209ENST00000495835 LINC01465Q8N7H1 131 aa27.28■■□□□ 1.96
HLA-C-209ENST00000495835 NSUN7Q8NE18 718 aaKnown RBP27.28■■□□□ 1.96
HLA-C-209ENST00000495835 LINC01599Q8WXQ3 324 aa27.28■■□□□ 1.96
HLA-C-209ENST00000495835 MAP7D2Q96T17 732 aa27.28■■□□□ 1.96
HLA-C-209ENST00000495835 ERVK-5Q9HDB9 667 aa27.28■■□□□ 1.96
HLA-C-209ENST00000495835 C5orf67F2Z3F1 127 aa27.27■■□□□ 1.96
HLA-C-209ENST00000495835 DKC1O60832 514 aaKnown RBP eCLIP27.27■■□□□ 1.96
HLA-C-209ENST00000495835 GPR32O75388 356 aa27.27■■□□□ 1.96
HLA-C-209ENST00000495835 LARGE1O95461 756 aa27.27■■□□□ 1.96
HLA-C-209ENST00000495835 KRT2P35908 639 aa27.27■■□□□ 1.96
HLA-C-209ENST00000495835 CDC42EP1Q00587 391 aa27.27■■□□□ 1.96
HLA-C-209ENST00000495835 PPP2R5CQ13362 524 aa27.27■■□□□ 1.96
HLA-C-209ENST00000495835 TARBP2Q15633 366 aaKnown RBP27.27■■□□□ 1.96
HLA-C-209ENST00000495835 PTPROQ16827 1216 aa27.27■■□□□ 1.96
HLA-C-209ENST00000495835 PIK3AP1Q6ZUJ8 805 aa27.27■■□□□ 1.96
HLA-C-209ENST00000495835 TRMT1LQ7Z2T5 733 aaKnown RBP27.27■■□□□ 1.96
HLA-C-209ENST00000495835 CLP1Q92989 425 aaKnown RBP27.27■■□□□ 1.96
HLA-C-209ENST00000495835 NOC2LQ9Y3T9 749 aaKnown RBP27.27■■□□□ 1.96
HLA-C-209ENST00000495835 SPTBN5Q9NRC6 3674 aaKnown RBP27.27■■□□□ 1.96
HLA-C-209ENST00000495835 RBAK-RBAKDNI3L0D1 243 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 SLC37A4O43826 429 aa27.26■■□□□ 1.95
HLA-C-209ENST00000495835 NFX1Q12986 1120 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms