RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 SAMD11Q96NU1 681 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 YME1L1Q96TA2 773 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 TSPYL2Q9H2G4 693 aaPredicted RBP8.16□□□□□ -1.1
VPS52-221ENST00000495755 TMX1Q9H3N1 280 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 CDHR5Q9HBB8 845 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 RC3H2Q9HBD1 1191 aaKnown RBP8.16□□□□□ -1.1
VPS52-221ENST00000495755 DISC1Q9NRI5 854 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 MTUS1Q9ULD2 1270 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 KCNJ14Q9UNX9 436 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 IGSF9BQ9UPX0 1349 aa8.16□□□□□ -1.1
VPS52-221ENST00000495755 H3BNC9 293 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 ZNF862O60290 1169 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 EIF5BO60841 1220 aaKnown RBP8.15□□□□□ -1.1
VPS52-221ENST00000495755 GAS7O60861 476 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 DTNBO60941 627 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 DGKIO75912 1065 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 CENPBP07199 599 aaPredicted RBP8.15□□□□□ -1.1
VPS52-221ENST00000495755 LINC00271P0C7V0 271 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 BMP1P13497 986 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 FDPSP14324 419 aaKnown RBP8.15□□□□□ -1.1
VPS52-221ENST00000495755 SFNP31947 248 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 JAK3P52333 1124 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 PAK2Q13177 524 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 NONOQ15233 471 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS52-221ENST00000495755 UGCGQ16739 394 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 ME3Q16798 604 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 EPC2Q52LR7 807 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 LRCH2Q5VUJ6 765 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 KRT25Q7Z3Z0 450 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 TMEM192Q8IY95 271 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 LINC01465Q8N7H1 131 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 NECAB1Q8N987 351 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 FBXO22Q8NEZ5 403 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 RDM1Q8NG50 284 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 ETNPPLQ8TBG4 499 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 ZNF689Q96CS4 500 aaPredicted RBP8.15□□□□□ -1.1
VPS52-221ENST00000495755 FAM167AQ96KS9 214 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 TEKT3Q9BXF9 490 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 FTHL17Q9BXU8 183 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 UNC45AQ9H3U1 944 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 ERVK-5Q9HDB9 667 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 NRBP2Q9NSY0 501 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 GJB4Q9NTQ9 266 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 ORC3Q9UBD5 711 aaPredicted RBP8.15□□□□□ -1.1
VPS52-221ENST00000495755 TCEAL9Q9UHQ7 104 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 COG5Q9UP83 839 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 CEP131Q9UPN4 1083 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 NOC2LQ9Y3T9 749 aaKnown RBP8.15□□□□□ -1.1
VPS52-221ENST00000495755 SAMM50Q9Y512 469 aa8.15□□□□□ -1.1
VPS52-221ENST00000495755 C5orf67F2Z3F1 127 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 MAGEB2O15479 319 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 CHMP2AO43633 222 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 GPR32O75388 356 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 STBD1O95210 358 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 LARGE1O95461 756 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 OATP04181 439 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 NEK4P51957 841 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 CRYBB1P53674 252 aaPredicted RBP8.14□□□□□ -1.11
VPS52-221ENST00000495755 TFF2Q03403 129 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 SKIV2LQ15477 1246 aaKnown RBP8.14□□□□□ -1.11
VPS52-221ENST00000495755 TARBP2Q15633 366 aaKnown RBP8.14□□□□□ -1.11
VPS52-221ENST00000495755 INF2Q27J81 1249 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 TMEM266Q2M3C6 531 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 PPP4R3AQ6IN85 833 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 TRMT1LQ7Z2T5 733 aaKnown RBP8.14□□□□□ -1.11
VPS52-221ENST00000495755 FIBCD1Q8N539 461 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 OXER1Q8TDS5 423 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 TMEM40Q8WWA1 233 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 CLP1Q92989 425 aaKnown RBP8.14□□□□□ -1.11
VPS52-221ENST00000495755 GTF3C6Q969F1 213 aa8.14□□□□□ -1.11
VPS52-221ENST00000495755 MRPL38Q96DV4 380 aaKnown RBP8.14□□□□□ -1.11
VPS52-221ENST00000495755 NIFKQ9BYG3 293 aaKnown RBP8.14□□□□□ -1.11
VPS52-221ENST00000495755 DDX25Q9UHL0 483 aaKnown RBP8.14□□□□□ -1.11
VPS52-221ENST00000495755 COL4A4P53420 1690 aaPredicted RBP8.14□□□□□ -1.11
VPS52-221ENST00000495755 TTC3P53804 2025 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 ADGRA3Q8IWK6 1321 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.13□□□□□ -1.11
VPS52-221ENST00000495755 CCDC194A0A1B0GVG4 234 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 SLC37A4O43826 429 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 MGEA5O60502 916 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 RPS6KA5O75582 802 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 VTNP04004 478 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 RB1P06400 928 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 XBP1P17861 261 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 BMPR1AP36894 532 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 CLCN3P51790 818 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 FAM189BP81408 668 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 PRKCEQ02156 737 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 NFX1Q12986 1120 aaKnown RBP8.13□□□□□ -1.11
VPS52-221ENST00000495755 GPM6BQ13491 265 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 BTG3Q14201 252 aaPredicted RBP8.13□□□□□ -1.11
VPS52-221ENST00000495755 PTPROQ16827 1216 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 AAK1Q2M2I8 961 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 KIZQ2M2Z5 673 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 LETM2Q2VYF4 491 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 XKR3Q5GH77 459 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 EARS2Q5JPH6 523 aaKnown RBP8.13□□□□□ -1.11
VPS52-221ENST00000495755 ODR4Q5SWX8 454 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 EFCAB12Q6NXP0 572 aa8.13□□□□□ -1.11
VPS52-221ENST00000495755 MIER3Q7Z3K6 550 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms