RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	HOXD8	P13378	290 aa	Predicted RBP	10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	DPCR1	Q3MIW9	517 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	UTP14C	Q5TAP6	766 aa	Known RBP	10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	ISM2	Q6H9L7	571 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	TLK2	Q86UE8	772 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	GAS2L3	Q86XJ1	694 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	SLAIN1	Q8ND83	568 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	PCYT2	Q99447	389 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	REEP2	Q9BRK0	252 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	RUSC1	Q9BVN2	902 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	DNAJC25	Q9H1X3	360 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	SPC25	Q9HBM1	224 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	CYP26B1	Q9NR63	512 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	TELO2	Q9Y4R8	837 aa		10.25	□□□□□ -0.77
PCDH15-223	ENST00000495484	SMTNL1	A8MU46	457 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	HBP1	O60381	514 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	KPNA6	O60684	536 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	FAM13A	O94988	1023 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	ERCC5	P28715	1186 aa	Predicted RBP	10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	RFC5	P40937	340 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	COBLL1	Q53SF7	1204 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	TMEM63B	Q5T3F8	832 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	MCPH1	Q8NEM0	835 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	ATP8B4	Q8TF62	1192 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	DRC1	Q96MC2	740 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	JPH2	Q9BR39	696 aa	Predicted RBP	10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	C17orf75	Q9HAS0	396 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	PARVG	Q9HBI0	331 aa		10.24	□□□□□ -0.77
PCDH15-223	ENST00000495484	FSD2	A1L4K1	749 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	BECN2	A8MW95	431 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	LGALS2	P05162	132 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	MMP3	P08254	477 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	RARB	P10826	455 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	ATP4A	P20648	1035 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	BMP6	P22004	513 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	CNGA1	P29973	690 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	MRE11	P49959	708 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	TPM4	P67936	248 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	CACNB2	Q08289	660 aa	Predicted RBP	10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	EHHADH	Q08426	723 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	UVSSA	Q2YD98	709 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	FAM26F	Q5R3K3	315 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	GJC2	Q5T442	439 aa	Predicted RBP	10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	STXBP4	Q6ZWJ1	553 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	DNAJC5G	Q8N7S2	189 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	SLC17A8	Q8NDX2	589 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	SLC7A3	Q8WY07	619 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	KIFAP3	Q92845	792 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	ZHX3	Q9H4I2	956 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	LARS	Q9P2J5	1176 aa	Known RBP	10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	LRRC37A2	A6NM11	1700 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	NPHP3-ACAD11	A0A0J9YXS1	232 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	GOLGA6L19	H0YKK7	550 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484		H3BRB1	525 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	PSMA7	O14818	248 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	IKBKB	O14920	756 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	GAS2	O43903	313 aa	Known RBP	10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	ZEB2	O60315	1214 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	MSC	O60682	206 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	USO1	O60763	962 aa	Known RBP	10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	PRKAR2A	P13861	404 aa	Known RBP	10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	ZNF131	P52739	623 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	POLG	P54098	1239 aa	Predicted RBP	10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	NPEPPS	P55786	919 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	CAP1	Q01518	475 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	RAD51AP2	Q09MP3	1159 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	COASY	Q13057	564 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	PLCB4	Q15147	1175 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	ZNF484	Q5JVG2	852 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	MAP3K21	Q5TCX8	1036 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	PLA2G4F	Q68DD2	849 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	MYCT1	Q8N699	235 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	RBSN	Q9H1K0	784 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	TUT1	Q9H6E5	874 aa	Known RBP	10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	ATP6V0A4	Q9HBG4	840 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	CBX8	Q9HC52	389 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	OLFML3	Q9NRN5	406 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	TRPC6	Q9Y210	931 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	TRIM17	Q9Y577	477 aa		10.23	□□□□□ -0.77
PCDH15-223	ENST00000495484	PLXNA1	Q9UIW2	1896 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	HIP1R	O75146	1068 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	MAPT	P10636	758 aa	Known RBP	10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	ELN	P15502	786 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	SCP2	P22307	547 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	ABCD1	P33897	745 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	GJA9	P57773	515 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	RTP1	P59025	263 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	NKX3-2	P78367	333 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	STK4	Q13043	487 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	TARBP2	Q15633	366 aa	Known RBP	10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	FSCN1	Q16658	493 aa	Known RBP	10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	MTERF2	Q49AM1	385 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	L1TD1	Q5T7N2	865 aa	Known RBP	10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	ADSSL1	Q8N142	457 aa		10.22	□□□□□ -0.77
PCDH15-223	ENST00000495484	GUF1	Q8N442	669 aa	Known RBP	10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms