RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
VTI1A-208ENST00000494728 CCDC148Q8NFR7 591 aa13.21□□□□□ -0.29
VTI1A-208ENST00000494728 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
VTI1A-208ENST00000494728 SAMD11Q96NU1 681 aa13.21□□□□□ -0.29
VTI1A-208ENST00000494728 CD320Q9NPF0 282 aa13.21□□□□□ -0.29
VTI1A-208ENST00000494728 RAPGEFL1Q9UHV5 662 aa13.21□□□□□ -0.29
VTI1A-208ENST00000494728 NOC2LQ9Y3T9 749 aaKnown RBP13.21□□□□□ -0.29
VTI1A-208ENST00000494728 MAFBQ9Y5Q3 323 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-208ENST00000494728 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-208ENST00000494728 M0R2N6 131 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 HBP1O60381 514 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 TDP2O95551 362 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 KCNA5P22460 613 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 PAK2Q13177 524 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 AAK1Q2M2I8 961 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 KIZQ2M2Z5 673 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 TCEAL5Q5H9L2 206 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 FAM160B1Q5W0V3 765 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 ZNF746Q6NUN9 644 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-208ENST00000494728 FIBCD1Q8N539 461 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 LINC01465Q8N7H1 131 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 CLP1Q92989 425 aaKnown RBP13.2□□□□□ -0.3
VTI1A-208ENST00000494728 ERVK-5Q9HDB9 667 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 GJB4Q9NTQ9 266 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 HCSTQ9UBK5 93 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 GABBR1Q9UBS5 961 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 GINS2Q9Y248 185 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 CYP46A1Q9Y6A2 500 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 MRPL42Q9Y6G3 142 aaKnown RBP13.2□□□□□ -0.3
VTI1A-208ENST00000494728 SQORQ9Y6N5 450 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 MUC6Q6W4X9 2439 aa13.2□□□□□ -0.3
VTI1A-208ENST00000494728 TMEM150BA6NC51 233 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 C5orf67F2Z3F1 127 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 EPB41L2O43491 1005 aaKnown RBP13.19□□□□□ -0.3
VTI1A-208ENST00000494728 CHMP2AO43633 222 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 VTNP04004 478 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 IBSPP21815 317 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-208ENST00000494728 DNAJB1P25685 340 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 AKAP17AQ02040 695 aaKnown RBP13.19□□□□□ -0.3
VTI1A-208ENST00000494728 CAMK1Q14012 370 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 BTG3Q14201 252 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-208ENST00000494728 COL19A1Q14993 1142 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 PAN2Q504Q3 1202 aaKnown RBP13.19□□□□□ -0.3
VTI1A-208ENST00000494728 FAM228AQ86W67 206 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 SMAP1Q8IYB5 467 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-208ENST00000494728 BANK1Q8NDB2 785 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-208ENST00000494728 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 SLC5A5Q92911 643 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 OSMRQ99650 979 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 TM6SF1Q9BZW5 370 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 UNC45AQ9H3U1 944 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 TBC1D22BQ9NU19 505 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 PCDHA4Q9UN74 947 aa13.19□□□□□ -0.3
VTI1A-208ENST00000494728 H3BQ06 376 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-208ENST00000494728 M0QZ92 97 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 GPR32O75388 356 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 RPLP2P05387 115 aaKnown RBP13.18□□□□□ -0.3
VTI1A-208ENST00000494728 IL9P15248 144 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 BMPR1AP36894 532 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 CLCN3P51790 818 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 PRKCEQ02156 737 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 SCRN1Q12765 414 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 TIGD5Q53EQ6 642 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 ZNF484Q5JVG2 852 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 MCTP2Q6DN12 878 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 NPAS4Q8IUM7 802 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 LRRC71Q8N4P6 559 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 BICD2Q8TD16 824 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 BBXQ8WY36 941 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-208ENST00000494728 ZNF274Q96GC6 653 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-208ENST00000494728 ZNF668Q96K58 619 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-208ENST00000494728 FTHL17Q9BXU8 183 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
VTI1A-208ENST00000494728 SH3GLB2Q9NR46 395 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 KCNJ14Q9UNX9 436 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 PCDHA10Q9Y5I2 948 aa13.18□□□□□ -0.3
VTI1A-208ENST00000494728 WDR64B1ANS9 1081 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 SLC37A4O43826 429 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 RPS6KA5O75582 802 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 PSMD10O75832 226 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 DEXIO95424 95 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 PSAPP07602 524 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 GTF2F1P35269 517 aaKnown RBP eCLIP13.17□□□□□ -0.3
VTI1A-208ENST00000494728 NLRP5P59047 1200 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 SSRP1Q08945 709 aaKnown RBP13.17□□□□□ -0.3
VTI1A-208ENST00000494728 NFX1Q12986 1120 aaKnown RBP13.17□□□□□ -0.3
VTI1A-208ENST00000494728 LEXMQ3ZCV2 418 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 LRCH2Q5VUJ6 765 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 B3GNT9Q6UX72 402 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 CMTR2Q8IYT2 770 aaKnown RBP13.17□□□□□ -0.3
VTI1A-208ENST00000494728 BLIDQ8IZY5 108 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 NME8Q8N427 588 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 DAGLBQ8NCG7 672 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 ETNPPLQ8TBG4 499 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 NEK9Q8TD19 979 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 NSUN3Q9H649 340 aaKnown RBP13.17□□□□□ -0.3
VTI1A-208ENST00000494728 DISC1Q9NRI5 854 aa13.17□□□□□ -0.3
VTI1A-208ENST00000494728 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms