RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 LARGE2Q8N3Y3 721 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 RIN2Q8WYP3 895 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-209ENST00000494623 GLIS2Q9BZE0 524 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-209ENST00000494623 PLCB1Q9NQ66 1216 aa12.28□□□□□ -0.44
CHMP3-209ENST00000494623 ZNF277Q9NRM2 450 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-209ENST00000494623 RBM12Q9NTZ6 932 aaKnown RBP12.28□□□□□ -0.44
CHMP3-209ENST00000494623 MRPL11Q9Y3B7 192 aaKnown RBP12.28□□□□□ -0.44
CHMP3-209ENST00000494623 DDX39AO00148 427 aaKnown RBP12.27□□□□□ -0.44
CHMP3-209ENST00000494623 GAP43P17677 238 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 COG2Q14746 738 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 EPHA7Q15375 998 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 CFAP221Q4G0U5 840 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 CEP55Q53EZ4 464 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 RBM46Q8TBY0 533 aaKnown RBP12.27□□□□□ -0.44
CHMP3-209ENST00000494623 SLC5A5Q92911 643 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 SLC35C1Q96A29 364 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 RANBP17Q9H2T7 1088 aaKnown RBP12.27□□□□□ -0.44
CHMP3-209ENST00000494623 PLEKHA4Q9H4M7 779 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 PKD2L1Q9P0L9 805 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 TSKSQ9UJT2 592 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 SYNPO2Q9UMS6 1093 aa12.27□□□□□ -0.44
CHMP3-209ENST00000494623 SCAF8Q9UPN6 1271 aaKnown RBP12.27□□□□□ -0.44
CHMP3-209ENST00000494623 SYF2O95926 243 aaKnown RBP12.27□□□□□ -0.45
CHMP3-209ENST00000494623 NOP2P46087 812 aaKnown RBP12.27□□□□□ -0.45
CHMP3-209ENST00000494623 ITIH3Q06033 890 aa12.27□□□□□ -0.45
CHMP3-209ENST00000494623 PPP2R5CQ13362 524 aa12.27□□□□□ -0.45
CHMP3-209ENST00000494623 SND1Q7KZF4 910 aaKnown RBP eCLIP12.27□□□□□ -0.45
CHMP3-209ENST00000494623 LDHDQ86WU2 507 aa12.27□□□□□ -0.45
CHMP3-209ENST00000494623 UNC45AQ9H3U1 944 aa12.27□□□□□ -0.45
CHMP3-209ENST00000494623 VCPKMTQ9H867 229 aa12.27□□□□□ -0.45
CHMP3-209ENST00000494623 PARVGQ9HBI0 331 aa12.27□□□□□ -0.45
CHMP3-209ENST00000494623 MED4Q9NPJ6 270 aa12.27□□□□□ -0.45
CHMP3-209ENST00000494623 OLFML3Q9NRN5 406 aa12.27□□□□□ -0.45
CHMP3-209ENST00000494623 GCNT4Q9P109 453 aa12.27□□□□□ -0.45
CHMP3-209ENST00000494623 WRAP73Q9P2S5 460 aaPredicted RBP12.27□□□□□ -0.45
CHMP3-209ENST00000494623 AJAP1Q9UKB5 411 aaPredicted RBP12.27□□□□□ -0.45
CHMP3-209ENST00000494623 VIL1P09327 827 aaKnown RBP12.26□□□□□ -0.45
CHMP3-209ENST00000494623 PLS1Q14651 629 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 PTPROQ16827 1216 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 MAEAQ7L5Y9 396 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 FAM186BQ8IYM0 893 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 NACC1Q96RE7 527 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 SHTN1A0MZ66 631 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 SLC16A3O15427 465 aaKnown RBP12.26□□□□□ -0.45
CHMP3-209ENST00000494623 RNF40O75150 1001 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 PSMC2P35998 433 aaKnown RBP12.26□□□□□ -0.45
CHMP3-209ENST00000494623 GGCXP38435 758 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 SLC15A2Q16348 729 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 MEI1Q5TIA1 1274 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 C8orf74Q6P047 294 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 BANK1Q8NDB2 785 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 AGBL1Q96MI9 1066 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 EHMT1Q9H9B1 1298 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 PSD3Q9NYI0 1048 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 BZW2Q9Y6E2 419 aaKnown RBP12.26□□□□□ -0.45
CHMP3-209ENST00000494623 CNTNAP1P78357 1384 aa12.26□□□□□ -0.45
CHMP3-209ENST00000494623 GRID2IPA4D2P6 1211 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 CAPN2P17655 700 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 AARSP49588 968 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHMP3-209ENST00000494623 CYP2J2P51589 502 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 ODR4Q5SWX8 454 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 ALKBH5Q6P6C2 394 aaKnown RBP12.25□□□□□ -0.45
CHMP3-209ENST00000494623 PAXIP1Q6ZW49 1069 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-209ENST00000494623 ZNF720Q7Z2F6 126 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 FAM178BQ8IXR5 827 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 AENQ8WTP8 325 aaKnown RBP12.25□□□□□ -0.45
CHMP3-209ENST00000494623 FAM204AQ9H8W3 233 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 SIX2Q9NPC8 291 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 NAGPAQ9UK23 515 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 PCDHGC5Q9Y5F6 944 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 CAP2P40123 477 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 SPDYE2Q495Y8 402 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 ZNF772Q68DY9 489 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-209ENST00000494623 KCTD17Q8N5Z5 321 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 TTLL6Q8N841 843 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 RDH13Q8NBN7 331 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 TEKT3Q9BXF9 490 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 GOLPH3Q9H4A6 298 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 CALCOCO1Q9P1Z2 691 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 STIM2Q9P246 746 aa12.25□□□□□ -0.45
CHMP3-209ENST00000494623 IPO5O00410 1097 aaKnown RBP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 EIF3DO15371 548 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 PPP1R12BO60237 982 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 GFPT2O94808 682 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 FAM160B2Q86V87 743 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 BORCS6Q96GS4 357 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 GMLQ99445 158 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 PDGFDQ9GZP0 370 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 RNF14Q9UBS8 474 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 ZMYM2Q9UBW7 1377 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 ZC3H4Q9UPT8 1303 aaKnown RBP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 FAM170AA1A519 330 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 ARHGEF35A5YM69 484 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 INPP5BP32019 993 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 EN1Q05925 392 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 C10orf76Q5T2E6 689 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-209ENST00000494623 HS2ST1Q7LGA3 356 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 GOLGA6L1Q8N7Z2 621 aa12.24□□□□□ -0.45
CHMP3-209ENST00000494623 TAF4BQ92750 862 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms