RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 SYT1P21579 422 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 TCF7P36402 384 aaPredicted RBP9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 NLRP5P59047 1200 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 KRT85P78386 507 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 DNTTIP2Q5QJE6 756 aaKnown RBP9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 ZNF746Q6NUN9 644 aaPredicted RBP9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 PADI6Q6TGC4 694 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 CAGE1Q8TC20 777 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 TBCKQ8TEA7 893 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 SEPT1Q8WYJ6 367 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 RIT2Q99578 217 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 ALG1Q9BT22 464 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 SCAND2PQ9GZW5 306 aaPredicted RBP9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 TUT1Q9H6E5 874 aaKnown RBP9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 MLXIPQ9HAP2 919 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 TMEM39AQ9NV64 488 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 SLC9A2Q9UBY0 812 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 USP25Q9UHP3 1055 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 VPS9D1Q9Y2B5 631 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 KIF3AQ9Y496 699 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 RALGAPA2Q2PPJ7 1873 aa9.48□□□□□ -0.89
GPATCH4-207ENST00000494414 KIAA1671Q9BY89 1806 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 ATG2AQ2TAZ0 1938 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 IPO5O00410 1097 aaKnown RBP9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 SOX1O00570 391 aaPredicted RBP9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 TDP2O95551 362 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 PFKMP08237 780 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 SMIM10L2AP0DMW4 78 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 SMIM10L2BP0DMW5 78 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 GCFC2P16383 781 aaKnown RBP9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 RFC2P35250 354 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 SLC26A2P50443 739 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 ACTR2P61160 394 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 MDM2Q00987 491 aaPredicted RBP9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 FPGSQ05932 587 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 SPIRE1Q08AE8 756 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 PTK7Q13308 1070 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 MBTPS1Q14703 1052 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 NONOQ15233 471 aaKnown RBP eCLIP9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 C9orf50Q5SZB4 431 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 MARCH8Q5T0T0 291 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 PLPPR4Q7Z2D5 763 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 PACS2Q86VP3 889 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 PLA2G4DQ86XP0 818 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 CCDC60Q8IWA6 550 aaPredicted RBP9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 CCDC83Q8IWF9 413 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 SMAP1Q8IYB5 467 aaPredicted RBP9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 LMBR1Q8WVP7 490 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 SLC4A5Q9BY07 1137 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 HIPK3Q9H422 1215 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 PRDM5Q9NQX1 630 aaPredicted RBP9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 TBC1D22BQ9NU19 505 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 VAV3Q9UKW4 847 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 ZNF215Q9UL58 517 aaPredicted RBP9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 MAFBQ9Y5Q3 323 aaPredicted RBP9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 COL1A2P08123 1366 aa9.47□□□□□ -0.89
GPATCH4-207ENST00000494414 ZBTB42B2RXF5 422 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 NOP56O00567 594 aaKnown RBP9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 WNT7AO00755 349 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 TBX3O15119 743 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 SLC37A4O43826 429 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 DTNBO60941 627 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 STBD1O95210 358 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 CYP2C9P11712 490 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 RAG1P15918 1043 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 ATP4AP20648 1035 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 GJB2P29033 226 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 CYP2C18P33260 490 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 KRT76Q01546 638 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 MGAT3Q09327 533 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 NR5A1Q13285 461 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 PPIGQ13427 754 aaKnown RBP eCLIP9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 PTGISQ16647 500 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 FAM26DQ5JW98 314 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 TMEM240Q5SV17 173 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 LARP1BQ659C4 914 aaKnown RBP9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 KRT40Q6A162 431 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 NEK8Q86SG6 692 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 LINC01465Q8N7H1 131 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 RNF214Q8ND24 703 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 FBXO18Q8NFZ0 1043 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 RDM1Q8NG50 284 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 PPP1R13LQ8WUF5 828 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 CEP89Q96ST8 783 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 SDF4Q9BRK5 362 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 UBE2OQ9C0C9 1292 aaKnown RBP9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 RNPEPQ9H4A4 650 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 IL23AQ9NPF7 189 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 ERAP1Q9NZ08 941 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 KIAA1468Q9P260 1216 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 PRKAG2Q9UGJ0 569 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 NRCAMQ92823 1304 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 NLRC5Q86WI3 1866 aa9.46□□□□□ -0.9
GPATCH4-207ENST00000494414 UQCRHLA0A096LP55 91 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 SORBS3O60504 671 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 PARNO95453 639 aaKnown RBP9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 UQCRHP07919 91 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 IQCF3P0C7M6 154 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 CSF2RAP15509 400 aa9.45□□□□□ -0.9
GPATCH4-207ENST00000494414 XBP1P17861 261 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms