RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 SEC16BQ96JE7 1060 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.36□□□□□ -1.87
PTPN12-212ENST00000494248 CYSRT1A8MQ03 144 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 ZNF185O15231 689 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 SLC26A4O43511 780 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 MRE11P49959 708 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 EPHA5P54756 1037 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 ACAP1Q15027 740 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 WDR72Q3MJ13 1102 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 HABP4Q5JVS0 413 aaKnown RBP3.36□□□□□ -1.87
PTPN12-212ENST00000494248 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.36□□□□□ -1.87
PTPN12-212ENST00000494248 METTL16Q86W50 562 aaKnown RBP3.36□□□□□ -1.87
PTPN12-212ENST00000494248 SLC25A43Q8WUT9 341 aaPredicted RBP3.36□□□□□ -1.87
PTPN12-212ENST00000494248 PUS7Q96PZ0 661 aaKnown RBP3.36□□□□□ -1.87
PTPN12-212ENST00000494248 GPR27Q9NS67 375 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 TRPS1Q9UHF7 1281 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 HS3ST4Q9Y661 456 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 XDHP47989 1333 aa3.36□□□□□ -1.87
PTPN12-212ENST00000494248 TRAF5O00463 557 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 SCAMP3O14828 347 aaKnown RBP3.35□□□□□ -1.87
PTPN12-212ENST00000494248 RECKO95980 971 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 VAMP1P23763 118 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 ZFP36P26651 326 aaKnown RBP3.35□□□□□ -1.87
PTPN12-212ENST00000494248 STAT3P40763 770 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 PTH2RP49190 550 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 DBPQ10586 325 aaPredicted RBP3.35□□□□□ -1.87
PTPN12-212ENST00000494248 MAP4K2Q12851 820 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 RIN1Q13671 783 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 CNGB1Q14028 1251 aaPredicted RBP3.35□□□□□ -1.87
PTPN12-212ENST00000494248 HECTD2Q5U5R9 776 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 STRIP1Q5VSL9 837 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 RD3Q7Z3Z2 195 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 ZNF276Q8N554 614 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 MPHOSPH9Q99550 1183 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 OR10A2Q9H208 303 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 TOR3AQ9H497 397 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 LRP2BPQ9P2M1 347 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 TESQ9UGI8 421 aaKnown RBP3.35□□□□□ -1.87
PTPN12-212ENST00000494248 NUB1Q9Y5A7 615 aa3.35□□□□□ -1.87
PTPN12-212ENST00000494248 PMS2P1A4D2B8 440 aa3.34□□□□□ -1.87
PTPN12-212ENST00000494248 GRXCR1A8MXD5 290 aa3.34□□□□□ -1.87
PTPN12-212ENST00000494248 SUSD5O60279 629 aa3.34□□□□□ -1.87
PTPN12-212ENST00000494248 KCNJ6P48051 423 aa3.34□□□□□ -1.87
PTPN12-212ENST00000494248 RSPO2Q6UXX9 243 aaPredicted RBP3.34□□□□□ -1.87
PTPN12-212ENST00000494248 PROKR1Q8TCW9 393 aa3.34□□□□□ -1.87
PTPN12-212ENST00000494248 SH3RF2Q8TEC5 729 aa3.34□□□□□ -1.87
PTPN12-212ENST00000494248 KLRG2A4D1S0 409 aaPredicted RBP3.33□□□□□ -1.88
PTPN12-212ENST00000494248 GRIA2P42262 883 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 MAN2A2P49641 1150 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 RABGGTBP53611 331 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 STILQ15468 1287 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 SV2CQ496J9 727 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 NBPF6Q5VWK0 638 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 C1QL3Q5VWW1 255 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 FBXO42Q6P3S6 717 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 C6orf15Q6UXA7 325 aaPredicted RBP3.33□□□□□ -1.88
PTPN12-212ENST00000494248 DPP8Q6V1X1 898 aaPredicted RBP3.33□□□□□ -1.88
PTPN12-212ENST00000494248 KCTD1Q719H9 257 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 GRASPQ7Z6J2 395 aaPredicted RBP3.33□□□□□ -1.88
PTPN12-212ENST00000494248 FAM178BQ8IXR5 827 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 ANKRD35Q8N283 1001 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 FAM98AQ8NCA5 519 aaKnown RBP3.33□□□□□ -1.88
PTPN12-212ENST00000494248 SCARB1Q8WTV0 552 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 MIEF2Q96C03 454 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 NBPF4Q96M43 638 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 KCNJ15Q99712 375 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 CD244Q9BZW8 370 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 FZD1Q9UP38 647 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 FRMD4BQ9Y2L6 1034 aa3.33□□□□□ -1.88
PTPN12-212ENST00000494248 COL11A2P13942 1736 aaPredicted RBP3.33□□□□□ -1.88
PTPN12-212ENST00000494248 TCRBV5S4A2TA0A5A2 114 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 FAM90A27PA6NNH2 459 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 GRK2P25098 689 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 GRK3P35626 688 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 SPIRE1Q08AE8 756 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 RABL3Q5HYI8 236 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 THAP3Q8WTV1 239 aaPredicted RBP3.32□□□□□ -1.88
PTPN12-212ENST00000494248 KCTD13Q8WZ19 329 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 WASF1Q92558 559 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 GPR87Q9BY21 358 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 EPN3Q9H201 632 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 RNF7Q9UBF6 113 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 DSEQ9UL01 958 aa3.32□□□□□ -1.88
PTPN12-212ENST00000494248 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.32□□□□□ -1.88
PTPN12-212ENST00000494248 ARHGEF17Q96PE2 2063 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-212ENST00000494248 SPATA31A6Q5VVP1 1343 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 ABHD16AO95870 558 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 ITGB1P05556 798 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 STAT5BP51692 787 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 PTTG1IPP53801 180 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 CD83Q01151 205 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 PTPAQ15257 358 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 KIZQ2M2Z5 673 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 TNNI3KQ59H18 835 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 LY6G5CQ5SRR4 150 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 SP5Q6BEB4 398 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-212ENST00000494248 MRM1Q6IN84 353 aaKnown RBP3.31□□□□□ -1.88
PTPN12-212ENST00000494248 SPATA3Q8NHX4 192 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 ANAPC16Q96DE5 110 aa3.31□□□□□ -1.88
PTPN12-212ENST00000494248 WNK4Q96J92 1243 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms